Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA.
Chemistry. 2011 Sep 26;17(40):11178-85. doi: 10.1002/chem.201101352. Epub 2011 Aug 29.
We report our studies of the vibrational dynamics of iron for three imidazole-ligated oxyheme derivatives that mimic the active sites of histidine-ligated heme proteins complexed with dioxygen. The experimental vibrational data are obtained from nuclear resonance vibrational spectroscopy (NRVS) measurements conducted on both powder samples and oriented single crystals, and which includes several in-plane (ip) and out-of-plane (oop) measurements. Vibrational spectral assignments have been made through a combination of the oriented sample spectra and predictions based on density functional theory (DFT) calculations. The two Fe-O(2) modes that have been previously observed by resonance Raman spectroscopy in heme proteins are clearly shown to be very strongly mixed and are not simply either a bending or stretching mode. In addition, a third Fe-O(2) mode, not previously reported, has been identified. The long-sought Fe-Im stretch, not observed in resonance Raman spectra, has been identified and compared with the frequencies observed for the analogous CO and NO species. The studies also suggest that the in-plane iron motion is anisotropic and is controlled by the orientation of the Fe-O(2) group and not sensitive to the in-plane Fe-N(p) bonds and/or imidazole orientations.
我们报告了对三种咪唑配位含氧血红素衍生物的振动动力学的研究,这些衍生物模拟了与氧配位的组氨酸配位血红素蛋白的活性部位。实验振动数据是通过在粉末样品和取向单晶上进行的核共振振动光谱 (NRVS) 测量获得的,其中包括几个面内 (ip) 和面外 (oop) 测量。通过取向样品光谱的组合以及基于密度泛函理论 (DFT) 计算的预测,进行了振动光谱分配。先前在血红素蛋白的共振拉曼光谱中观察到的两个 Fe-O(2) 模式被清楚地表明是非常强烈混合的,而不是简单的弯曲或拉伸模式。此外,还确定了以前未报道的第三个 Fe-O(2) 模式。长期以来一直寻求的 Fe-Im 伸缩振动,在共振拉曼光谱中未观察到,已被识别并与类似的 CO 和 NO 物种的频率进行了比较。这些研究还表明,面内铁运动是各向异性的,由 Fe-O(2) 基团的取向控制,而对面内 Fe-N(p) 键和/或咪唑取向不敏感。