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血红素在气相全肌红蛋白阳离子中的配位:远端变近端?

Heme binding in gas-phase holo-myoglobin cations: distal becomes proximal?

机构信息

Division of Physiological Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Scheelesväg 2, SE-17 177 Stockholm, Sweden.

出版信息

J Am Soc Mass Spectrom. 2011 Oct;22(10):1763-70. doi: 10.1007/s13361-011-0182-0. Epub 2011 Jul 19.

DOI:10.1007/s13361-011-0182-0
PMID:21952890
Abstract

His64 and His93 are the two well-known sites of heme binding in water-dissolved holo-myoglobin, with His93 being a proximal, strongly binding partner, while the distal His64 weakly coordinates to the heme through a small-molecule ligand, e.g., water or O(2). The heme bonding scheme in a water-free environment is as yet unclear. Here we employed electron transfer dissociation tandem mass spectrometry to study the preferential attachment site of the ferri-heme (Fe(3+)) in electrospray-produced 12+, 14+, and 16+ holo-myoglobin ions. Contrary to expectations, in lower-charge complexes that should have a structure resembling that in solution, the heme seems to be preferentially attached to the "distal" histidine. In contrast, in the highest studied charge state, the "proximal" histidine is the site of preferential attachment; the 14+ charge state is an intermediate case. This surprising finding raises a question of heme coordination in proteins transferred to water-free environment, as well as the effect of the protonation sites on heme bonding.

摘要

His64 和 His93 是水合血红素-肌红蛋白中两个众所周知的血红素结合位点,His93 是一个紧邻的、强结合配体,而远端的 His64 通过小分子配体(如水或 O(2))弱配位到血红素上。在无水环境中,血红素的结合方案尚不清楚。在这里,我们采用电子转移解离串联质谱法研究了电喷雾产生的 12+、14+和 16+ 血红素-肌红蛋白离子中 ferri-heme(Fe(3+))的优先附着位点。与预期相反,在电荷较低的配合物中,其结构应类似于溶液中的结构,血红素似乎优先附着在“远端”组氨酸上。相比之下,在研究的最高电荷状态下,“近端”组氨酸是优先附着的位点;14+ 电荷状态是一个中间情况。这一惊人的发现提出了一个问题,即在转移到无水环境的蛋白质中,血红素的配位以及质子化位点对血红素键合的影响。

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1
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2
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J Am Soc Mass Spectrom. 2010 Oct;21(10):1762-74. doi: 10.1016/j.jasms.2010.06.012. Epub 2010 Jun 25.
3
Reversible dioxygen binding in solvent-free liquid myoglobin.
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Int J Mass Spectrom. 2018 Apr;427:157-164. doi: 10.1016/j.ijms.2017.12.006. Epub 2017 Dec 24.
4
Salt Bridge Rearrangement (SaBRe) Explains the Dissociation Behavior of Noncovalent Complexes.盐桥重排(SaBRe)解释了非共价复合物的离解行为。
J Am Soc Mass Spectrom. 2016 Jun;27(6):975-90. doi: 10.1007/s13361-016-1375-3. Epub 2016 Apr 6.
5
Real-time HD Exchange Kinetics of Proteins from Buffered Aqueous Solution with Electrothermal Supercharging and Top-Down Tandem Mass Spectrometry.实时 HD 交换动力学:电热超荷与自上而下串联质谱法从缓冲水溶液中分离蛋白质。
J Am Soc Mass Spectrom. 2016 Jun;27(6):1019-27. doi: 10.1007/s13361-016-1350-z. Epub 2016 Feb 26.
6
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J Am Soc Mass Spectrom. 2015 Jul;26(7):1059-67. doi: 10.1007/s13361-015-1088-z. Epub 2015 Apr 14.
7
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J Am Chem Soc. 2014 Sep 17;136(37):12920-8. doi: 10.1021/ja505217w. Epub 2014 Sep 3.
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9
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10
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5
New reagents for increasing ESI multiple charging of proteins and protein complexes.用于增加 ESI 多重蛋白质和蛋白质复合物的新试剂。
J Am Soc Mass Spectrom. 2010 Jan;21(1):127-31. doi: 10.1016/j.jasms.2009.09.014. Epub 2009 Sep 30.
6
Increasing charge while preserving noncovalent protein complexes for ESI-MS.在保留用于电喷雾电离质谱(ESI-MS)的非共价蛋白质复合物的同时增加电荷。
J Am Soc Mass Spectrom. 2009 Apr;20(4):593-6. doi: 10.1016/j.jasms.2008.11.013. Epub 2008 Nov 27.
7
Top-down ESI-ECD-FT-ICR mass spectrometry localizes noncovalent protein-ligand binding sites.自上而下的电喷雾离子化-电子捕获解离-傅里叶变换离子回旋共振质谱法可定位非共价蛋白质-配体结合位点。
J Am Chem Soc. 2006 Nov 15;128(45):14432-3. doi: 10.1021/ja063197p.
8
Coulomb effects in binding of heme in gas-phase ions of myoglobin.肌红蛋白气相离子中血红素结合的库仑效应。
Rapid Commun Mass Spectrom. 2006;20(2):111-7. doi: 10.1002/rcm.2273.
9
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Proc Natl Acad Sci U S A. 2004 Jun 29;101(26):9528-33. doi: 10.1073/pnas.0402700101. Epub 2004 Jun 21.
10
A three-dimensional model of the myoglobin molecule obtained by x-ray analysis.通过X射线分析获得的肌红蛋白分子的三维模型。
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