Helicos BioSciences Corporation, Cambridge, MA, USA.
Wiley Interdiscip Rev RNA. 2011 Jul-Aug;2(4):565-70. doi: 10.1002/wrna.84. Epub 2011 Mar 14.
Methods for in-depth genome-wide characterization of transcriptomes and quantification of transcript levels using various microarray and next-generation sequencing technologies have emerged as valuable tools for understanding cellular physiology and human disease biology and have begun to be utilized in various clinical diagnostic applications. Current methods, however, typically require RNA to be converted to complementary DNA prior to measurements. This step has been shown to introduce many biases and artifacts. In order to best characterize the 'true' transcriptome, the single-molecule direct RNA sequencing (DRS) technology was developed. This review focuses on the underlying principles behind the DRS, sample preparation steps, and the current and novel avenues of research and applications DRS offers.
方法用于深入的基因组范围内的转录组学特征和各种微阵列和下一代测序技术的转录水平的定量已成为了解细胞生理学和人类疾病生物学的有价值的工具,并已开始在各种临床诊断应用中使用。然而,目前的方法通常需要在测量之前将 RNA 转化为 cDNA。这一步骤已被证明会引入许多偏差和伪影。为了最好地描述“真实”的转录组,开发了单分子直接 RNA 测序(DRS)技术。本综述重点介绍了 DRS 的基本原理、样品制备步骤,以及 DRS 提供的当前和新颖的研究和应用途径。