一株中国强毒猪流行性腹泻病毒的全基因组序列。
Complete genome sequence of a Chinese virulent porcine epidemic diarrhea virus strain.
机构信息
Division of Swine Infectious Diseases, State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin 150001, People's Republic of China.
出版信息
J Virol. 2011 Nov;85(21):11538-9. doi: 10.1128/JVI.06024-11.
Abstract
CH/S is a virulent porcine epidemic diarrhea virus (PEDV) strain and is used as the virulent strain to evaluate the protection rates of vaccines against PEDV infection in China. Here, we report the complete genome sequence of strain CH/S, which may aid in understanding the molecular characteristics of this strain.
摘要
CH/S 是一种强毒猪流行性腹泻病毒（PEDV）毒株，被用作中国评估 PEDV 感染疫苗保护率的强毒毒株。在此，我们报告了该毒株 CH/S 的全基因组序列，这可能有助于了解该毒株的分子特征。
相似文献
1
Complete genome sequence of a Chinese virulent porcine epidemic diarrhea virus strain.
J Virol. 2011 Nov;85(21):11538-9. doi: 10.1128/JVI.06024-11.
2
Complete genome sequences of a Korean virulent porcine epidemic diarrhea virus and its attenuated counterpart.
J Virol. 2012 May;86(10):5964. doi: 10.1128/JVI.00557-12.
3
Genetic properties of endemic Chinese porcine epidemic diarrhea virus strains isolated since 2010.
Arch Virol. 2013 Dec;158(12):2487-94. doi: 10.1007/s00705-013-1767-7.
4
Complete genome sequence of a novel porcine epidemic diarrhea virus in south China.
J Virol. 2012 Sep;86(18):10248-9. doi: 10.1128/JVI.01589-12.
5
Molecular characteristics of the spike gene of porcine epidemic diarrhoea virus strains in Eastern China in 2016.
Virus Res. 2018 Mar 2;247:47-54. doi: 10.1016/j.virusres.2018.01.013. Epub 2018 Feb 3.
6
A newly isolated Chinese virulent genotype GIIb porcine epidemic diarrhea virus strain: Biological characteristics, pathogenicity and immune protective effects as an inactivated vaccine candidate.
Virus Res. 2019 Jan 2;259:18-27. doi: 10.1016/j.virusres.2018.10.012. Epub 2018 Oct 17.
7
Genomic and epidemiological characteristics provide new insights into the phylogeographical and spatiotemporal spread of porcine epidemic diarrhea virus in Asia.
J Clin Microbiol. 2015 May;53(5):1484-92. doi: 10.1128/JCM.02898-14. Epub 2015 Feb 18.
8
Identification and pathogenicity of a variant porcine epidemic diarrhea virus field strain with reduced virulence.
Virol J. 2015 Jun 12;12:88. doi: 10.1186/s12985-015-0314-4.
9
Characteristics of the spike and ORF3 genes of porcine epidemic diarrhea virus in Henan and Shanxi provinces of China.
Arch Virol. 2020 Oct;165(10):2323-2333. doi: 10.1007/s00705-020-04744-x. Epub 2020 Jul 26.
10
Complete genome sequences of novel S-deletion variants of porcine epidemic diarrhea virus identified from a recurrent outbreak on Jeju Island, South Korea.
Arch Virol. 2019 Oct;164(10):2621-2625. doi: 10.1007/s00705-019-04360-4. Epub 2019 Jul 26.
引用本文的文献
1
Based on the Results of PEDV Phylogenetic Analysis of the Most Recent Isolates in China, the Occurrence of Further Mutations in the Antigenic Site S1° and COE of the S Protein Which Is the Target Protein of the Vaccine.
Transbound Emerg Dis. 2023 Feb 22;2023:1227110. doi: 10.1155/2023/1227110. eCollection 2023.
2
Epidemiological Study and Genetic Diversity Assessment of Porcine Epidemic Diarrhea Virus (PEDV) in Yunnan Province, China.
Viruses. 2025 Feb 14;17(2):264. doi: 10.3390/v17020264.
3
Construction and Immunogenicity of a Recombinant Porcine Pseudorabies Virus (PRV) Expressing the Major Neutralizing Epitope Regions of S1 Protein of Variant PEDV.
Viruses. 2024 Oct 8;16(10):1580. doi: 10.3390/v16101580.
4
Elevation of IL-8 secretion induced by PEDV infection via NF-κB signaling pathway.
Front Cell Infect Microbiol. 2024 Jul 22;14:1422560. doi: 10.3389/fcimb.2024.1422560. eCollection 2024.
5
Virological evaluation of natural and modified attapulgite against porcine epidemic diarrhoea virus.
Virol J. 2024 May 30;21(1):120. doi: 10.1186/s12985-024-02396-w.
6
Licorice extract inhibits porcine epidemic diarrhea virus and .
J Gen Virol. 2024 Mar;105(3). doi: 10.1099/jgv.0.001964.
7
Isolation, identification, and pathogenicity of porcine epidemic diarrhea virus.
Front Microbiol. 2023 Oct 13;14:1273589. doi: 10.3389/fmicb.2023.1273589. eCollection 2023.
8
Global Dynamics of Porcine Enteric Coronavirus PEDV Epidemiology, Evolution, and Transmission.
Mol Biol Evol. 2023 Mar 4;40(3). doi: 10.1093/molbev/msad052.
9
Virtual Screening-Based Peptides Targeting Spike Protein to Inhibit Porcine Epidemic Diarrhea Virus (PEDV) Infection.
Viruses. 2023 Jan 28;15(2):381. doi: 10.3390/v15020381.
10
A new PEDV strain CH/HLJJS/2022 can challenge current detection methods and vaccines.
Virol J. 2023 Jan 20;20(1):13. doi: 10.1186/s12985-023-01961-z.
本文引用的文献
1
Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia.
J Virol. 2005 Jan;79(2):884-95. doi: 10.1128/JVI.79.2.884-895.2005.
2
Coronavirus genome structure and replication.
Curr Top Microbiol Immunol. 2005;287:1-30. doi: 10.1007/3-540-26765-4_1.
3
Characterization of a novel coronavirus associated with severe acute respiratory syndrome.
Science. 2003 May 30;300(5624):1394-9. doi: 10.1126/science.1085952. Epub 2003 May 1.
4
Full-length genomic sequence of bovine coronavirus (31 kb). Completion of the open reading frame 1a/1b sequences.
Adv Exp Med Biol. 2001;494:73-6.
5
Completion of the porcine epidemic diarrhoea coronavirus (PEDV) genome sequence.
Virus Genes. 2001;23(2):137-44. doi: 10.1023/a:1011831902219.
6
Comparison of genomic and predicted amino acid sequences of respiratory and enteric bovine coronaviruses isolated from the same animal with fatal shipping pneumonia.
J Gen Virol. 2001 Dec;82(Pt 12):2927-2933. doi: 10.1099/0022-1317-82-12-2927.
7
Complete genome sequence of transmissible gastroenteritis coronavirus PUR46-MAD clone and evolution of the purdue virus cluster.
Virus Genes. 2001;23(1):105-18. doi: 10.1023/a:1011147832586.
8
Mouse hepatitis virus type-2 infection in mice: an experimental model system of acute meningitis and hepatitis.
Exp Mol Pathol. 2001 Aug;71(1):1-12. doi: 10.1006/exmp.2001.2378.
9
Coronavirus derived expression systems.
J Biotechnol. 2001 Jul 12;88(3):183-204. doi: 10.1016/s0168-1656(01)00281-4.
10
Infectious RNA transcribed in vitro from a cDNA copy of the human coronavirus genome cloned in vaccinia virus.
J Gen Virol. 2001 Jun;82(Pt 6):1273-1281. doi: 10.1099/0022-1317-82-6-1273.
Zotero 插件