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沙眼衣原体核糖核苷酸还原酶 R2c 中的异双核 Mn/Fe 辅因子的锰离子位于金属位置 1。

The manganese ion of the heterodinuclear Mn/Fe cofactor in Chlamydia trachomatis ribonucleotide reductase R2c is located at metal position 1.

机构信息

Department of Biochemistry and Biophysics, Stockholm University, S-10691 Stockholm, Sweden.

出版信息

J Am Chem Soc. 2012 Jan 11;134(1):123-5. doi: 10.1021/ja209678x. Epub 2011 Dec 8.

Abstract

The essential catalytic radical of Class-I ribonucleotide reductase is generated and delivered by protein R2, carrying a dinuclear metal cofactor. A new R2 subclass, R2c, prototyped by the Chlamydia trachomatis protein was recently discovered. This protein carries an oxygen-activating heterodinuclear Mn(II)/Fe(II) metal cofactor and generates a radical-equivalent Mn(IV)/Fe(III) oxidation state of the metal site, as opposed to the tyrosyl radical generated by other R2 subclasses. The metal arrangement of the heterodinuclear cofactor remains unknown. Is the metal positioning specific, and if so, where is which ion located? Here we use X-ray crystallography with anomalous scattering to show that the metal arrangement of this cofactor is specific with the manganese ion occupying metal position 1. This is the position proximal to the tyrosyl radical site in other R2 proteins and consistent with the assumption that the high-valent Mn(IV) species functions as a direct substitute for the tyrosyl radical.

摘要

I 类核糖核苷酸还原酶的基本催化自由基是由携带双核金属辅因子的蛋白 R2 产生和传递的。最近发现了一种新的 R2 亚类 R2c,其原型是衣原体蛋白。该蛋白携带一个氧活化的异双核 Mn(II)/Fe(II)金属辅因子,并产生金属部位的自由基等价 Mn(IV)/Fe(III)氧化态,而不是其他 R2 亚类产生的酪氨酸自由基。异双核辅因子的金属排列仍然未知。金属定位是否具有特异性,如果是,哪个离子位于何处?在这里,我们使用带有异常散射的 X 射线晶体学表明,该辅因子的金属排列具有特异性,其中锰离子占据金属位置 1。这是其他 R2 蛋白中靠近酪氨酸自由基位点的位置,与假设高氧化态 Mn(IV)物种作为酪氨酸自由基的直接替代物一致。

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