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在球形红杆菌的反应中心中,蛋白质动力学在引导电子转移途径中的作用。

Role of protein dynamics in guiding electron-transfer pathways in reaction centers from Rhodobacter sphaeroides.

机构信息

State Key Laboratory on Integrated Optoelectronics, College of Electronic Science and Engineering, Jilin University, Changchun, China.

出版信息

J Phys Chem B. 2012 Jan 12;116(1):711-7. doi: 10.1021/jp211702b. Epub 2011 Dec 21.

DOI:10.1021/jp211702b
PMID:22148392
Abstract

The role of protein dynamics in guiding multistep electron transfer is explored in the photosynthetic reaction center of Rhodobacter sphaeroides . The energetics of the charge-separated intermediates, P(+)B(A)(-) and P(+)H(A)(-) (P is the initial electron donor bacteriochlorophyll pair and B(A) and H(A) are early bacteriochlorophyll and bacteriopheophytin acceptors, respectively), were systematically varied in a series of mutants. A fast phase of P(+)H(A)(-) recombination was resolved that is very sensitive to driving force. Either increasing or decreasing the relative free energy of P(+)H(A)(-) resulted in a more prominent fast recombination component, and thus a decreased yield forward electron transfer. The fast phase apparently represents P(+)H(A)(-) charge recombination via an activated state, probably P(+)B(A)(-) (B(A) is situated between P and H(A)). In wild type, this activated state is largely inaccessible, presumably due to dynamic stabilization of P(+)H(A)(-) within the first 100 ps. In mutants that change the energetics, the rate of decay via the activated state accelerates and that pathway becomes significant. The dynamic stabilization of the protein makes it possible to achieve a nearly optimum environment of H(A) in wild type on two different time scales and for two rather different reactions. On the picosecond time scale, the energetics is nearly, though not perfectly, optimized for transfer between the excited state of P and H(A). After dynamic stabilization of the state P(+)H(A)(-), the environment is optimized to avoid rapid recombination of the charge-separated state and instead carry out forward electron transfer to the quinone with very high yield on the hundreds of picosecond time scale. Thus, by employing protein dynamics, the reaction center is able to optimize multiple reactions, on very different time scales involving the same reaction intermediate.

摘要

在球形红杆菌的光合反应中心中探索了蛋白质动力学在指导多步电子转移中的作用。电荷分离中间体 P(+)B(A)(-)和 P(+)H(A)(-)(P 是初始电子供体细菌叶绿素对,B(A)和 H(A)分别是早期细菌叶绿素和细菌叶啉受体)的能量学在一系列突变体中得到了系统的改变。解析了一个对驱动力非常敏感的快速 P(+)H(A)(-)复合相。无论是增加还是减少 P(+)H(A)(-)的相对自由能,都会导致更快的快速复合成分,从而降低向前电子转移的产率。这个快速相显然代表了 P(+)H(A)(-)通过一个活化态的电荷复合,可能是 P(+)B(A)(-)(B(A)位于 P 和 H(A)之间)。在野生型中,这种活化态在很大程度上是不可达到的,可能是由于 P(+)H(A)(-)在最初的 100 皮秒内的动态稳定化。在改变能量学的突变体中,通过活化态的衰减速率加速,该途径变得显著。蛋白质的动态稳定化使得在两个不同的时间尺度上和两个相当不同的反应中,在野生型中实现 H(A)的近乎最佳环境成为可能。在皮秒时间尺度上,尽管不是完美的,但 P 与 H(A)之间的激发态之间的能量学几乎是优化的。在 P(+)H(A)(-)状态的动力学稳定化之后,环境被优化以避免电荷分离态的快速复合,而是在数百皮秒的时间尺度上以非常高的产率将电子向前转移到醌。因此,通过利用蛋白质动力学,反应中心能够优化多个反应,这些反应涉及相同的反应中间体,但其时间尺度却非常不同。

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