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戴蒙德氏菌属海生新种,从海水分离得到。

Winogradskyella damuponensis sp. nov., isolated from seawater.

机构信息

Department of Chemical Engineering, Pohang University of Science and Technology, San 31, Hyoja-Dong, Pohang 790-784, Republic of Korea.

Gyeongbuk Sea Grant Institute, Pohang University of Science and Technology, San 31, Hyoja-Dong, Pohang 790-784, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Jan;63(Pt 1):321-326. doi: 10.1099/ijs.0.041384-0. Epub 2012 Mar 16.

Abstract

A novel bacterium, designated F081-2(T), isolated from seawater from Damupo beach in Pohang, Korea, was investigated using a polyphasic taxonomic approach. Cells were yellow-pigmented, strictly aerobic, motile by gliding, Gram-negative-staining and rod-shaped. The temperature, pH and NaCl ranges for growth were 4-35 °C, pH 5.5-9.5 and 1.0-5.0 %, respectively. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain F081-2(T) belonged to a distinct lineage in the genus Winogradskyella of the family Flavobacteriaceae, sharing 93.7-98.1 % similarity with recognized members of the genus. Low levels of DNA-DNA relatedness values were found between strain F081-2(T) and Winogradskyella eximia KCTC 12219(T) (61.1 %), Winogradskyella thalassocola KCTC 12221(T) (47.0 %), Winogradskyella echinorum KCTC 22026(T) (39.3 %), Winogradskyella rapida CCUG 56098(T) (34.3 %) and Winogradskyella arenosi JCM 17633(T) (33.4 %). The major cellular fatty acids were iso-C(15 : 0) (25.3 %), iso-C(15 : 1) G (14.6 %), iso-C(17 : 0) 3-OH (9.3 %), anteiso-C(15 : 0) (7.8 %) and iso-C(15 : 0) 3-OH (7.6 %). The polar lipid profile was composed of phosphatidylethanolamine, one unidentified aminolipid, one unidentified phospholipid, one unidentified aminophospholipid and six unidentified lipids. The major respiratory quinone was menaquinone-6 and the DNA G+C content of the strain was 32.3 mol%. On the basis of phenotypic, phylogenetic and genotypic data, strain F081-2(T) represents a novel species within the genus Winogradskyella, for which the name Winogradskyella damuponensis sp. nov. is proposed. The type strain is F081-2(T) (=KCTC 23552(T) = JCM 17633(T)).

摘要

从韩国保宁市 Damupo 海滩的海水中分离到一株新的细菌,命名为 F081-2(T)。采用多相分类学方法对其进行了研究。细胞呈黄色素,严格需氧,可通过滑行运动,革兰氏阴性染色,呈杆状。生长的温度、pH 值和 NaCl 范围分别为 4-35°C、pH5.5-9.5 和 1.0-5.0%。基于 16S rRNA 基因序列的系统发育分析表明,菌株 F081-2(T)属于黄杆菌科 Winogradskyella 属的一个独特谱系,与该属公认成员的相似度为 93.7-98.1%。菌株 F081-2(T)与 Winogradskyella eximia KCTC 12219(T)(61.1%)、Winogradskyella thalassocola KCTC 12221(T)(47.0%)、Winogradskyella echinorum KCTC 22026(T)(39.3%)、Winogradskyella rapida CCUG 56098(T)(34.3%)和 Winogradskyella arenosi JCM 17633(T)(33.4%)之间的 DNA-DNA 同源性值较低。主要的细胞脂肪酸为 iso-C(15:0)(25.3%)、iso-C(15:1)G(14.6%)、iso-C(17:0)3-OH(9.3%)、anteiso-C(15:0)(7.8%)和 iso-C(15:0)3-OH(7.6%)。极性脂谱由磷脂酰乙醇胺、一种未鉴定的胺脂、一种未鉴定的磷脂、一种未鉴定的氨基磷脂和六种未鉴定的脂组成。主要的呼吸醌为menaquinone-6,菌株的 DNA G+C 含量为 32.3mol%。基于表型、系统发育和基因型数据,菌株 F081-2(T)代表了 Winogradskyella 属中的一个新种,因此建议将其命名为 Winogradskyella damuponensis sp. nov.。模式菌株为 F081-2(T)=KCTC 23552(T)=JCM 17633(T)。

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