Department of Genetics, Stanford University, Stanford, CA 94305-5120, USA.
Database (Oxford). 2012 Mar 20;2012:bar062. doi: 10.1093/database/bar062. Print 2012.
The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org/) provides high-quality curated genomic, genetic, and molecular information on the genes and their products of the budding yeast Saccharomyces cerevisiae. To accommodate the increasingly complex, diverse needs of researchers for searching and comparing data, SGD has implemented InterMine (http://www.InterMine.org), an open source data warehouse system with a sophisticated querying interface, to create YeastMine (http://yeastmine.yeastgenome.org). YeastMine is a multifaceted search and retrieval environment that provides access to diverse data types. Searches can be initiated with a list of genes, a list of Gene Ontology terms, or lists of many other data types. The results from queries can be combined for further analysis and saved or downloaded in customizable file formats. Queries themselves can be customized by modifying predefined templates or by creating a new template to access a combination of specific data types. YeastMine offers multiple scenarios in which it can be used such as a powerful search interface, a discovery tool, a curation aid and also a complex database presentation format. DATABASE URL: http://yeastmine.yeastgenome.org.
酿酒酵母基因组数据库（SGD；http://www.yeastgenome.org/）提供了高质量的经过精心整理的关于酿酒酵母基因组、遗传和分子信息，包括基因及其产物。为了满足研究人员对搜索和比较数据的日益复杂和多样化的需求，SGD 已经实现了 InterMine（http://www.InterMine.org），这是一个开源的数据仓库系统，具有复杂的查询界面，用于创建 YeastMine（http://yeastmine.yeastgenome.org）。YeastMine 是一个多方面的搜索和检索环境，提供了对多种数据类型的访问。搜索可以从基因列表、GO 术语列表或许多其他数据类型列表开始。查询结果可以组合进行进一步分析，并以可定制的文件格式保存或下载。查询本身可以通过修改预定义模板或创建新模板来定制，以访问特定数据类型的组合。YeastMine 提供了多种使用场景，例如强大的搜索界面、发现工具、编目辅助工具以及复杂的数据库呈现格式。数据库 URL：http://yeastmine.yeastgenome.org。
