Neighboring-gene effect: a genetic uncertainty principle.

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作者信息

Baryshnikova Anastasia, Andrews Brenda

出版信息

Nat Methods. 2012 Mar 27;9(4):341, 343. doi: 10.1038/nmeth.1936.

DOI:10.1038/nmeth.1936

PMID:22453910

Abstract

摘要

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Evidence for co-evolution of gene order and recombination rate.

Nat Genet. 2003 Mar;33(3):392-5. doi: 10.1038/ng1111. Epub 2003 Feb 10.

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Nature. 2002 Jul 25;418(6896):387-91. doi: 10.1038/nature00935.

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