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使用固态 (2)H- 和 (15)N-NMR 进行跨膜肽取向的比较分析:流动性很重要。

Comparative analysis of the orientation of transmembrane peptides using solid-state (2)H- and (15)N-NMR: mobility matters.

机构信息

Institute for Biological Interfaces (IBG-2) and Institute of Organic Chemistry and CFN, Karlsruhe Institute of Technology, Karlsruhe, Germany.

出版信息

Eur Biophys J. 2012 May;41(5):475-82. doi: 10.1007/s00249-012-0801-0. Epub 2012 Mar 28.

Abstract

Many solid-state nuclear magnetic resonance (NMR) approaches for membrane proteins rely on orientation-dependent parameters, from which the alignment of peptide segments in the lipid bilayer can be calculated. Molecules embedded in liquid-crystalline membranes, such as monomeric helices, are highly mobile, leading to partial averaging of the measured NMR parameters. These dynamic effects need to be taken into account to avoid misinterpretation of NMR data. Here, we compare two common NMR approaches: (2)H-NMR quadrupolar waves, and separated local field (15)N-(1)H polarization inversion spin exchange at magic angle (PISEMA) spectra, in order to identify their strengths and drawbacks for correctly determining the orientation and mobility of α-helical transmembrane peptides. We first analyzed the model peptide WLP23 in oriented dimyristoylphosphatidylcholine (DMPC) membranes and then contrasted it with published data on GWALP23 in dilauroylphosphatidylcholine (DLPC). We only obtained consistent tilt angles from the two methods when taking dynamics into account. Interestingly, the two related peptides differ fundamentally in their mobility. Although both helices adopt the same tilt in their respective bilayers (~20°), WLP23 undergoes extensive fluctuations in its azimuthal rotation angle, whereas GWALP23 is much less dynamic. Both alternative NMR methods are suitable for characterizing orientation and dynamics, yet they can be optimally used to address different aspects. PISEMA spectra immediately reveal the presence of large-amplitude rotational fluctuations, which are not directly seen by (2)H-NMR. On the other hand, PISEMA was unable to define the azimuthal rotation angle in the case of the highly dynamic WLP23, though the helix tilt could still be determined, irrespective of any dynamics parameters.

摘要

许多固态核磁共振(NMR)方法都依赖于与取向有关的参数,这些参数可以计算出肽段在脂质双层中的取向。嵌入液晶膜中的分子,如单体螺旋,具有高度的流动性,导致测量的 NMR 参数发生部分平均。这些动态效应需要被考虑在内,以避免对 NMR 数据的错误解释。在这里,我们比较了两种常见的 NMR 方法:(2)H-NMR 四极波和分离局部场(15)N-(1)H 极化反转魔角自旋交换(PISEMA)谱,以确定它们在正确确定α-螺旋跨膜肽的取向和流动性方面的优缺点。我们首先分析了模型肽 WLP23 在定向二肉豆蔻酰磷脂酰胆碱(DMPC)膜中的情况,然后将其与 GWALP23 在二棕榈酰磷脂酰胆碱(DLPC)中的发表数据进行了对比。只有在考虑动力学的情况下,我们才从这两种方法中获得了一致的倾斜角度。有趣的是,这两个相关的肽在它们的流动性上有根本的不同。虽然这两个螺旋在它们各自的双层中都采用相同的倾斜角度(~20°),但 WLP23 的方位旋转角度经历了广泛的波动,而 GWALP23 的动态性要小得多。这两种替代 NMR 方法都适用于表征取向和动态性,但它们可以针对不同的方面进行最佳利用。PISEMA 谱立即揭示了大振幅旋转波动的存在,而(2)H-NMR 则无法直接看到这些波动。另一方面,PISEMA 无法确定高度动态的 WLP23 的方位旋转角度,尽管可以确定螺旋倾斜角,而无需任何动力学参数。

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