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2
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Biophys J. 2011 Dec 21;101(12):2939-47. doi: 10.1016/j.bpj.2011.11.008. Epub 2011 Dec 20.
3
The structural and topological analysis of membrane-associated polypeptides by oriented solid-state NMR spectroscopy: established concepts and novel developments.通过定向固态 NMR 光谱学分析膜相关多肽的结构和拓扑结构:既定概念和新发展。
Biophys Chem. 2011 Jan;153(2-3):115-25. doi: 10.1016/j.bpc.2010.11.002. Epub 2010 Nov 12.
4
Charged or aromatic anchor residue dependence of transmembrane peptide tilt.荷电或芳基锚定残基对跨膜肽倾斜的依赖性。
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Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.化学位移张量——核磁共振的核心:对蛋白质生物学方面的见解。
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Changes in transmembrane helix alignment by arginine residues revealed by solid-state NMR experiments and coarse-grained MD simulations.通过固态 NMR 实验和粗粒 MD 模拟揭示精氨酸残基引起的跨膜螺旋排列的变化。
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Influence of proline upon the folding and geometry of the WALP19 transmembrane peptide.脯氨酸对 WALP19 跨膜肽折叠和构象的影响。
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GWALP23 在不同厚度脂质双层中的脯氨酸扭角分布。

Proline kink angle distributions for GWALP23 in lipid bilayers of different thicknesses.

机构信息

Department of Chemistry and Biochemistry, University of Arkansas, Fayetteville, Arkansas 72701, United States.

出版信息

Biochemistry. 2012 May 1;51(17):3554-64. doi: 10.1021/bi300281k. Epub 2012 Apr 18.

DOI:10.1021/bi300281k
PMID:22489564
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3558528/
Abstract

By using selected (2)H and (15)N labels, we have examined the influence of a central proline residue on the properties of a defined peptide that spans lipid bilayer membranes by solid-state nuclear magnetic resonance (NMR) spectroscopy. For this purpose, GWALP23 (acetyl-GGALW(5)LALALALALALALW(19)LAGA-ethanolamide) is a suitable model peptide that employs, for the purpose of interfacial anchoring, only one tryptophan residue on either end of a central α-helical core sequence. Because of its systematic behavior in lipid bilayer membranes of differing thicknesses [Vostrikov, V. V., et al. (2010) J. Biol. Chem. 285, 31723-31730], we utilize GWALP23 as a well-characterized framework for introducing guest residues within a transmembrane sequence; for example, a central proline yields acetyl-GGALW(5)LALALAP(12)ALALALW(19)LAGA-ethanolamide. We synthesized GWALP23-P12 with specifically placed (2)H and (15)N labels for solid-state NMR spectroscopy and examined the peptide orientation and segmental tilt in oriented DMPC lipid bilayer membranes using combined (2)H GALA and (15)N-(1)H high-resolution separated local field methods. In DMPC bilayer membranes, the peptide segments N-terminal and C-terminal to the proline are both tilted substantially with respect to the bilayer normal, by ~34 ± 5° and 29 ± 5°, respectively. While the tilt increases for both segments when proline is present, the range and extent of the individual segment motions are comparable to or smaller than those of the entire GWALP23 peptide in bilayer membranes. In DMPC, the proline induces a kink of ~30 ± 5°, with an apparent helix unwinding or "swivel" angle of ~70°. In DLPC and DOPC, on the basis of (2)H NMR data only, the kink angle and swivel angle probability distributions overlap those of DMPC, yet the most probable kink angle appears to be somewhat smaller than in DMPC. As has been described for GWALP23 itself, the C-terminal helix ends before Ala(21) in the phospholipids DMPC and DLPC yet remains intact through Ala(21) in DOPC. The dynamics of bilayer-incorporated, membrane-spanning GWALP23 and GWALP23-P12 are less extensive than those observed for WALP family peptides that have more than two interfacial Trp residues.

摘要

通过使用选定的 (2)H 和 (15)N 标记,我们通过固态核磁共振(NMR)光谱研究了中央脯氨酸残基对跨越脂质双层膜的特定肽性质的影响。为此,GWALP23(乙酰-GGALW(5)LALALALALALW(19)LAGA-乙醇酰胺)是一种合适的模型肽,它仅在中央α-螺旋核心序列的两端使用一个色氨酸残基用于界面锚定。由于其在不同厚度的脂质双层膜中的系统行为[Vostrikov,VV 等人。(2010)J. Biol. Chem. 285, 31723-31730],我们将 GWALP23 用作在跨膜序列中引入客位残基的经过充分表征的框架;例如,中央脯氨酸产生乙酰-GGALW(5)LALALAP(12)ALALALW(19)LAGA-乙醇酰胺。我们合成了具有特定 (2)H 和 (15)N 标记的 GWALP23-P12 用于固态 NMR 光谱,并使用结合的 (2)H GALA 和 (15)N-(1)H 高分辨率分离局部场方法研究了定向 DMPC 脂质双层膜中肽的取向和片段倾斜。在 DMPC 双层膜中,相对于双层法线,脯氨酸两侧的 N 末端和 C 末端肽段都有很大的倾斜,分别为~34±5°和 29±5°。尽管当脯氨酸存在时两个片段的倾斜度都增加,但各个片段运动的范围和程度与双层膜中的整个 GWALP23 肽相似或小于该肽。在 DMPC 中,脯氨酸诱导约 30±5°的弯曲,并且明显的螺旋解绕或“旋转”角度约为 70°。在 DLPC 和 DOPC 中,仅基于 (2)H NMR 数据,弯曲角度和旋转角度的概率分布与 DMPC 重叠,但最可能的弯曲角度似乎比 DMPC 略小。正如已经描述的 GWALP23 本身一样,在磷脂 DMPC 和 DLPC 中,C 末端螺旋在丙氨酸(21)之前结束,但在 DOPC 中仍保持完整直至丙氨酸(21)。掺入双层膜的、跨膜的 GWALP23 和 GWALP23-P12 的动力学比 WALP 家族肽的动力学要广泛,这些肽具有两个以上的界面色氨酸残基。