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本文引用的文献

1
Self-assembly of functional, amphipathic amyloid monolayers by the fungal hydrophobin EAS.真菌疏水蛋白 EAS 诱导的功能性两亲性淀粉样单层的自组装。
Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):E804-11. doi: 10.1073/pnas.1114052109. Epub 2012 Jan 23.
2
Energy landscape of the prion protein helix 1 probed by metadynamics and NMR.变分动力学和 NMR 探测朊病毒蛋白螺旋 1 的能量景观。
Biophys J. 2012 Jan 4;102(1):158-67. doi: 10.1016/j.bpj.2011.12.003. Epub 2012 Jan 3.
3
Experimental free energy surfaces reveal the mechanisms of maintenance of protein solubility.实验自由能表面揭示了维持蛋白质可溶性的机制。
Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):21057-62. doi: 10.1073/pnas.1112197108. Epub 2011 Dec 12.
4
Extended surfaces modulate hydrophobic interactions of neighboring solutes.扩展表面调节相邻溶质的疏水相互作用。
Proc Natl Acad Sci U S A. 2011 Oct 25;108(43):17678-83. doi: 10.1073/pnas.1110703108. Epub 2011 Oct 10.
5
Molecular chaperones in protein folding and proteostasis.分子伴侣在蛋白质折叠和蛋白稳态中的作用。
Nature. 2011 Jul 20;475(7356):324-32. doi: 10.1038/nature10317.
6
Dynamically committed, uncommitted, and quenched states encoded in protein kinase A revealed by NMR spectroscopy.通过核磁共振波谱学揭示的蛋白激酶 A 的动态结合、未结合和失活状态。
Proc Natl Acad Sci U S A. 2011 Apr 26;108(17):6969-74. doi: 10.1073/pnas.1102701108. Epub 2011 Apr 6.
7
Factors governing fibrillogenesis of polypeptide chains revealed by lattice models.由晶格模型揭示的控制多肽链原纤维形成的因素。
Phys Rev Lett. 2010 Nov 19;105(21):218101. doi: 10.1103/PhysRevLett.105.218101. Epub 2010 Nov 17.
8
Dynamics connect substrate recognition to catalysis in protein kinase A.动力学将底物识别与蛋白激酶 A 的催化作用联系起来。
Nat Chem Biol. 2010 Nov;6(11):821-8. doi: 10.1038/nchembio.452. Epub 2010 Oct 3.
9
Quantitative approaches to defining normal and aberrant protein homeostasis.定量方法定义正常和异常的蛋白质动态平衡。
Faraday Discuss. 2009;143:277-91; discussion 359-72. doi: 10.1039/b905825g.
10
Dynamic activation of an allosteric regulatory protein.变构调节蛋白的动态激活
Nature. 2009 Nov 19;462(7271):368-72. doi: 10.1038/nature08560.

内在无序调节蛋白质的自组装和聚集。

Intrinsic disorder modulates protein self-assembly and aggregation.

机构信息

Division of Molecular Biosciences, Imperial College London, South Kensington SW7 2AZ, United Kingdom.

出版信息

Proc Natl Acad Sci U S A. 2012 May 1;109(18):6951-6. doi: 10.1073/pnas.1118048109. Epub 2012 Apr 16.

DOI:10.1073/pnas.1118048109
PMID:22509003
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3344965/
Abstract

Protein molecules have evolved to adopt distinctive and well-defined functional and soluble states under physiological conditions. In some circumstances, however, proteins can self-assemble into fibrillar aggregates designated as amyloid fibrils. In vivo these processes are normally associated with severe pathological conditions but can sometimes have functional relevance. One such example is the hydrophobins, whose aggregation at air-water interfaces serves to create robust protein coats that help fungal spores to resist wetting and thus facilitate their dispersal in the air. We have performed multiscale simulations to address the molecular determinants governing the formation of functional amyloids by the class I fungal hydrophobin EAS. Extensive samplings of full-atom replica-exchange molecular dynamics and coarse-grained simulations have allowed us to identify factors that distinguish aggregation-prone from highly soluble states of EAS. As a result of unfavourable entropic terms, highly dynamical regions are shown to exert a crucial influence on the propensity of the protein to aggregate under different conditions. More generally, our findings suggest a key role that specific flexible structural elements can play to ensure the existence of soluble and functional states of proteins under physiological conditions.

摘要

蛋白质分子在生理条件下已经进化为具有独特和明确的功能和可溶性状态。然而,在某些情况下,蛋白质可以自我组装成称为淀粉样纤维的纤维状聚集物。在体内,这些过程通常与严重的病理状况有关,但有时也具有功能相关性。其中一个例子是亲水性蛋白,其在气液界面的聚集有助于形成坚固的蛋白质外壳,帮助真菌孢子抵抗润湿,从而促进它们在空气中的传播。我们进行了多尺度模拟,以解决由 I 类真菌亲水性蛋白 EAS 形成功能性淀粉样蛋白的分子决定因素。全原子复制交换分子动力学和粗粒化模拟的广泛采样使我们能够确定区分易于聚集和高度可溶性状态的因素。由于不利的熵项,高动态区域被证明对蛋白质在不同条件下聚集的倾向具有至关重要的影响。更一般地说,我们的发现表明,特定的灵活结构元件可以在生理条件下确保蛋白质的可溶性和功能性状态的存在中发挥关键作用。