Department of Biochemistry, University of Minnesota, Minneapolis, MN 55455-0431, USA.
Proc Natl Acad Sci U S A. 2011 Apr 26;108(17):6969-74. doi: 10.1073/pnas.1102701108. Epub 2011 Apr 6.
Protein kinase A (PKA) is a ubiquitous phosphoryl transferase that mediates hundreds of cell signaling events. During turnover, its catalytic subunit (PKA-C) interconverts between three major conformational states (open, intermediate, and closed) that are dynamically and allosterically activated by nucleotide binding. We show that the structural transitions between these conformational states are minimal and allosteric dynamics encode the motions from one state to the next. NMR and molecular dynamics simulations define the energy landscape of PKA-C, with the substrate allowing the enzyme to adopt a broad distribution of conformations (dynamically committed state) and the inhibitors (high magnesium and pseudosubstrate) locking it into discrete minima (dynamically quenched state), thereby reducing the motions that allow turnover. These results unveil the role of internal dynamics in both kinase function and regulation.
蛋白激酶 A(PKA)是一种普遍存在的磷酸转移酶,介导数百种细胞信号事件。在周转过程中,其催化亚基(PKA-C)在开放、中间和关闭三种主要构象状态之间相互转换,这些构象状态通过核苷酸结合动态和变构激活。我们表明,这些构象状态之间的结构转变很小,变构动力学编码了从一种状态到另一种状态的运动。NMR 和分子动力学模拟定义了 PKA-C 的能量景观,底物允许酶采用广泛的构象分布(动态约束状态),抑制剂(高镁和伪底物)将其锁定在离散的最小值(动态猝灭状态),从而减少允许周转的运动。这些结果揭示了内部动力学在激酶功能和调节中的作用。