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黄花微菌属,一个从日本采集的地衣中分离出来的新型放线菌,以及对黄花微菌属的描述的修正。

Luteimicrobium album sp. nov., a novel actinobacterium isolated from a lichen collected in Japan, and emended description of the genus Luteimicrobium.

机构信息

NITE Biological Resource Center, National Institute of Technology and Evaluation, Kisarazu, Chiba, Japan.

出版信息

J Antibiot (Tokyo). 2012 Aug;65(8):427-31. doi: 10.1038/ja.2012.45. Epub 2012 Jun 6.

DOI:10.1038/ja.2012.45
PMID:22669446
Abstract

A novel Gram-stain-positive actinobacterium, designated RI148-Li105(T), was isolated from a lichen sample from Rishiri Island, Japan, and its taxonomic position was investigated by a polyphasic approach. 16S rRNA gene sequencing study indicated that strain RI148-Li105(T) was related to the type strain of Luteimicrobium subarcticum, with a similarity of 97.8%. Cells of strain RI148-Li105(T) exhibited a rod-coccus cycle. The diagnostic cell-wall diamino acid of this organism was lysine and the peptidoglycan type was found to be A4α. The predominant menaquinones were MK-8(H(2)) and MK-9(H(2)), and the major fatty acids were iso-C(16:0), C(17:1) ω9c and C(17:0). The DNA G+C content was 73.6 mol%. The major phenotypic characteristics of strain RI148-Li105(T) basically corresponded to those of the genus Luteimicrobium excluding the fatty acid composition. These results suggest that strain RI148-Li105(T) should be affiliated with the genus Luteimicrobium. Meanwhile, DNA-DNA hybridization and some phenotypic characteristics revealed that the strain differs from L. subarcticum. Therefore, strain RI148-Li105(T) represents a novel species of the genus Luteimicrobium, for which the name Luteimicrobium album sp. nov. is proposed. The type strain of Luteimicrobium album is RI148-Li105(T) (=NBRC 106348(T)=DSM 24866(T)).

摘要

一株新的革兰氏阳性放线菌,命名为 RI148-Li105(T),从日本利尻岛的地衣样本中分离得到,通过多相分类法研究其分类地位。16S rRNA 基因测序研究表明,菌株 RI148-Li105(T)与北极黄杆菌的模式株关系最为密切,相似性为 97.8%。菌株 RI148-Li105(T)的细胞表现出杆状-球菌循环。该生物的诊断细胞壁二氨基庚二酸是赖氨酸,肽聚糖类型为 A4α。主要的类异戊二烯醌为 MK-8(H(2))和 MK-9(H(2)),主要脂肪酸为 iso-C(16:0)、C(17:1) ω9c 和 C(17:0)。DNA G+C 含量为 73.6mol%。菌株 RI148-Li105(T)的主要表型特征基本与北极黄杆菌属相符,除了脂肪酸组成外。这些结果表明,菌株 RI148-Li105(T)应属于北极黄杆菌属。同时,DNA-DNA 杂交和一些表型特征表明,该菌株与北极黄杆菌不同。因此,菌株 RI148-Li105(T)代表了北极黄杆菌属的一个新种,命名为 Luteimicrobium album sp. nov.。Luteimicrobium album 的模式株为 RI148-Li105(T)=NBRC 106348(T)=DSM 24866(T)。

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