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哈氏嗜盐古菌模式菌株(SH-6(T))的全基因组序列

Complete genome sequence of Halopiger xanaduensis type strain (SH-6(T)).

作者信息

Anderson Iain, Tindall Brian J, Rohde Manfred, Lucas Susan, Han James, Lapidus Alla, Cheng Jan-Fang, Goodwin Lynne, Pitluck Sam, Peters Lin, Pati Amrita, Mikhailova Natalia, Pagani Ioanna, Teshima Hazuki, Han Cliff, Tapia Roxanne, Land Miriam, Woyke Tanja, Klenk Hans-Peter, Kyrpides Nikos, Ivanova Natalia

出版信息

Stand Genomic Sci. 2012 Mar 19;6(1):31-42. doi: 10.4056/sigs.2505605. Epub 2012 Mar 5.

Abstract

Halopiger xanaduensis is the type species of the genus Halopiger and belongs to the euryarchaeal family Halobacteriaceae. H. xanaduensis strain SH-6, which is designated as the type strain, was isolated from the sediment of a salt lake in Inner Mongolia, Lake Shangmatala. Like other members of the family Halobacteriaceae, it is an extreme halophile requiring at least 2.5 M salt for growth. We report here the sequencing and annotation of the 4,355,268 bp genome, which includes one chromosome and three plasmids. This genome is part of a Joint Genome Institute (JGI) Community Sequencing Program (CSP) project to sequence diverse haloarchaeal genomes.

摘要

嗜盐栖热菌是嗜盐栖热菌属的模式种,属于广古菌门盐杆菌科。嗜盐栖热菌SH-6菌株被指定为模式菌株,它是从内蒙古盐湖上马塔拉湖的沉积物中分离出来的。与盐杆菌科的其他成员一样,它是一种极端嗜盐菌,生长至少需要2.5 M的盐。我们在此报告了4,355,268 bp基因组的测序和注释,该基因组包括一条染色体和三个质粒。该基因组是联合基因组研究所(JGI)社区测序计划(CSP)项目的一部分,该项目旨在对多种嗜盐古菌基因组进行测序。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1300/3368405/354f3d50748e/sigs.2505605-f1.jpg

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