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提高牛乳腺炎 D 群链球菌的鉴定水平,包括 MALDI-TOF 质谱分析,以及随后对相应粪肠球菌和屎肠球菌分离株的分子特征分析。

Improved identification including MALDI-TOF mass spectrometry analysis of group D streptococci from bovine mastitis and subsequent molecular characterization of corresponding Enterococcus faecalis and Enterococcus faecium isolates.

机构信息

Department of Infectious Diseases, Robert Koch Institute, Wernigerode Branch, Germany.

出版信息

Vet Microbiol. 2012 Nov 9;160(1-2):162-9. doi: 10.1016/j.vetmic.2012.05.019. Epub 2012 May 23.

Abstract

We examined 199 group D streptococci isolated from clinically defined and epidemiologically unrelated cases of bovine mastitis. Samples were collected during a 5-month period from 2010 to 2011 from diseased animals in 199 herds (1 isolate per herd) raised in different counties and federal states in Germany. A classical enterococcal species identification procedure started with PYRase and catalase assays, growth on Enterococcoselagar(®) and GCG(®) agar plates and in 6.5% NaCl followed by a biochemical reaction panel. All 199 isolates were also subjected to MALDI-TOF MS diagnostics in which a simple and an extended direct transfer protocol were compared. The latter revealed a much better performance (higher log (score) values) although the same result was obtained in all but three cases. Classical and MALDI TOF MS analyses identified 64 Enterococcus faecalis and 37 Enterococcus faecium isolates which were confirmed by species-specific PCRs. These 101 enterococcal isolates did not display a specific multi-resistance phenotype and resistances to glycopeptides and antibiotics of last resort (linezolid, daptomycin, tigecycline) were absent, resistance to tetracycline was the most frequent resistance feature. Molecular typing of the 64 E. faecalis isolates revealed 3 main PFGE clusters of related strains represented by three MLST types (ST40, ST211, ST268). PFGE and MLST analysis of E. faecium isolates revealed several smaller clusters of only a few related strains and identified a number of previously unknown allele and MLST types (n=6; ST624-ST629) besides known variants (ST22, ST32). One of the 37 E. faecium strains showed properties of hospital-associated E. faecium strains (ampicillin resistance, IS16-positive; MLST CC17).

摘要

我们检查了 199 株从临床上定义的和流行病学上无关的牛乳腺炎病例中分离出来的 D 组链球菌。这些样本是在 2010 年至 2011 年期间从德国不同县和联邦州的 199 个牧场(每个牧场 1 株)的患病动物身上收集的。经典的肠球菌种鉴定程序从 PYRase 和过氧化氢酶检测开始,在 Enterococcoselagar(®)和 GCG(®)琼脂平板和 6.5%NaCl 中生长,然后进行生化反应组。所有 199 株分离物也接受了 MALDI-TOF MS 诊断,比较了简单和扩展的直接转移方案。虽然在所有情况下都得到了相同的结果,但后者的性能要好得多(更高的 log(得分)值)。经典和 MALDI TOF MS 分析鉴定出 64 株粪肠球菌和 37 株屎肠球菌分离株,这些分离株通过种特异性 PCR 得到确认。这 101 株肠球菌分离株没有表现出特定的多耐药表型,也没有对糖肽类和最后手段的抗生素(利奈唑胺、达托霉素、替加环素)产生耐药性,对四环素的耐药性是最常见的耐药特征。64 株粪肠球菌分离株的分子分型显示了 3 个主要的 PFGE 相关菌株簇,代表了 3 种 MLST 类型(ST40、ST211、ST268)。E. faecium 分离株的 PFGE 和 MLST 分析显示,只有少数相关菌株存在几个较小的簇,并鉴定出一些以前未知的等位基因和 MLST 类型(n=6;ST624-ST629),以及已知的变体(ST22、ST32)。37 株屎肠球菌中有一株表现出医院相关屎肠球菌菌株的特性(氨苄西林耐药,IS16 阳性;MLST CC17)。

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