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Algorithm validation using multicolor phantoms.

作者信息

Samarov Daniel V, Clarke Matthew L, Lee Ji Youn, Allen David W, Litorja Maritoni, Hwang Jeeseong

出版信息

Biomed Opt Express. 2012 Jun 1;3(6):1300-11. doi: 10.1364/BOE.3.001300. Epub 2012 May 9.

DOI:10.1364/BOE.3.001300
PMID:22741077
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3370971/
Abstract

We present a framework for hyperspectral image (HSI) analysis validation, specifically abundance fraction estimation based on HSI measurements of water soluble dye mixtures printed on microarray chips. In our work we focus on the performance of two algorithms, the Least Absolute Shrinkage and Selection Operator (LASSO) and the Spatial LASSO (SPLASSO). The LASSO is a well known statistical method for simultaneously performing model estimation and variable selection. In the context of estimating abundance fractions in a HSI scene, the "sparse" representations provided by the LASSO are appropriate as not every pixel will be expected to contain every endmember. The SPLASSO is a novel approach we introduce here for HSI analysis which takes the framework of the LASSO algorithm a step further and incorporates the rich spatial information which is available in HSI to further improve the estimates of abundance. In our work here we introduce the dye mixture platform as a new benchmark data set for hyperspectral biomedical image processing and show our algorithm's improvement over the standard LASSO.

摘要

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本文引用的文献

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Biomed Opt Express. 2012 Jun 1;3(6):1291-9. doi: 10.1364/BOE.3.001291. Epub 2012 May 9.
2
Active DLP hyperspectral illumination: a noninvasive, in vivo, system characterization visualizing tissue oxygenation at near video rates.主动式 DLP 高光谱照明:一种非侵入式、体内系统特性可视化技术,可实现近视频速率的组织氧合可视化。
Anal Chem. 2011 Oct 1;83(19):7424-30. doi: 10.1021/ac201467v. Epub 2011 Aug 31.
3
Review of tissue simulating phantoms for optical spectroscopy, imaging and dosimetry.用于光学光谱、成像和剂量测定的组织模拟体模综述。
J Biomed Opt. 2006 Jul-Aug;11(4):041102. doi: 10.1117/1.2335429.
4
Development of an advanced hyperspectral imaging (HSI) system with applications for cancer detection.开发一种用于癌症检测的先进高光谱成像(HSI)系统。
Ann Biomed Eng. 2006 Jun;34(6):1061-8. doi: 10.1007/s10439-006-9121-9. Epub 2006 May 9.
5
Hyperspectral imaging of hemoglobin saturation in tumor microvasculature and tumor hypoxia development.肿瘤微血管中血红蛋白饱和度的高光谱成像与肿瘤缺氧发展
J Biomed Opt. 2005 Jul-Aug;10(4):44004. doi: 10.1117/1.2003369.