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热毁丝霉菌纤维素酶在细菌微晶纤维素上的表面扩散有限。

Thermobifida fusca cellulases exhibit limited surface diffusion on bacterial micro-crystalline cellulose.

机构信息

Department of Biological and Environmental Engineering, Cornell University, Ithaca, New York 14850, USA.

出版信息

Biotechnol Bioeng. 2013 Jan;110(1):47-56. doi: 10.1002/bit.24604. Epub 2012 Jul 25.

Abstract

Elucidation of cellulase-cellulose interactions is key to modeling biomass deconstruction and in understanding the processes that lead to cellulase inactivation. Here, fluorescence recovery after photobleaching and single molecule tracking (SMT) experiments are used to assess the surface diffusion of Thermobifida fusca cellulases on bacterial micro-crystalline cellulose. Our results show that cellulases exhibit limited surface diffusion when bound to crystalline cellulose and that a large fraction of the cellulases remain immobile even at temperatures optimal for catalysis. A comparison of our experimental results to Monte Carlo (MC) simulations, which use published diffusion coefficients to model cellulase displacements, shows that even those enzymes that are mobile on the cellulose surface exhibit significantly slower diffusive motions than previously reported. In addition, it is observed that the enzymes that show significant displacements exhibit complex, non-steady surface motions, which suggest that cellulose-bound cellulases exist in molecular states with different diffusive characteristics. These results challenge the notion that cellulases can freely diffuse over cellulose surfaces without catalyzing bond cleavage.

摘要

阐明纤维素酶与纤维素的相互作用是对生物质解构进行建模以及理解导致纤维素酶失活的过程的关键。在这里,使用光漂白后荧光恢复和单分子跟踪 (SMT) 实验来评估嗜热纤维梭菌纤维素酶在细菌微晶纤维素上的表面扩散。我们的结果表明,当结合结晶纤维素时,纤维素酶的表面扩散受到限制,即使在最适合催化的温度下,仍有很大一部分纤维素酶处于不活动状态。将我们的实验结果与使用已发表的扩散系数来模拟纤维素酶位移的蒙特卡罗 (MC) 模拟进行比较表明,即使在纤维素表面上可移动的那些酶,其扩散运动也明显慢于先前报道的速度。此外,观察到显示出明显位移的酶表现出复杂的、非稳态的表面运动,这表明结合在纤维素上的纤维素酶存在具有不同扩散特性的分子状态。这些结果挑战了纤维素酶可以在不催化键断裂的情况下在纤维素表面上自由扩散的观点。

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