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嗜甲基菌属菌株JAM1和嗜甲基菌属菌株JAM7的全基因组序列。

Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga sp. strain JAM7.

作者信息

Villeneuve Céline, Martineau Christine, Mauffrey Florian, Villemur Richard

机构信息

INRS-Institut Armand-Frappier, Laval, Québec, Canada.

出版信息

J Bacteriol. 2012 Aug;194(15):4126-7. doi: 10.1128/JB.00726-12.

DOI:10.1128/JB.00726-12
PMID:22815445
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3416558/
Abstract

Methylophaga sp. strains JAM1 and JAM7 have been isolated from a denitrification system. Strain JAM1 was the first Methylophaga strain reported to be able to grow under denitrifying conditions. Here, we report the complete genome sequences of the two strains, which allowed prediction of gene clusters involved in denitrification in strain JAM1.

摘要

甲基噬菌属（Methylophaga）菌株JAM1和JAM7是从一个反硝化系统中分离出来的。菌株JAM1是首个被报道能够在反硝化条件下生长的甲基噬菌属菌株。在此，我们报告这两个菌株的完整基因组序列，这使得对菌株JAM1中参与反硝化作用的基因簇进行预测成为可能。

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本文引用的文献

1
Methylophaga lonarensis sp. nov., a moderately haloalkaliphilic methylotroph isolated from the soda lake sediments of a meteorite impact crater. lonarensis sp. nov.，一种从中性盐湖沉积物中分离出来的中度嗜盐嗜碱的甲基营养菌。
Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1613-1618. doi: 10.1099/ijs.0.035089-0. Epub 2011 Sep 2.
2
Emended description of the genus Methylophaga Janvier et al. 1985.修改后的甲基杆菌属描述 Janvier 等人，1985 年。
Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1644-1646. doi: 10.1099/ijs.0.033639-0. Epub 2011 Sep 2.
3
Draft genome sequence of Methylophaga aminisulfidivorans MP T.Methylophaga aminisulfidivorans MP T 基因组草图
J Bacteriol. 2011 Aug;193(16):4265. doi: 10.1128/JB.05403-11. Epub 2011 Jun 17.
4
Draft genome sequence of the chemolithoheterotrophic, halophilic methylotroph Methylophaga thiooxydans DMS010.嗜硫、嗜盐化能异养甲基营养菌 DMS010 的基因组草图序列
J Bacteriol. 2011 Jun;193(12):3154-5. doi: 10.1128/JB.00388-11. Epub 2011 Apr 8.
5
Oxidation of dimethylsulfide to tetrathionate by Methylophaga thiooxidans sp. nov.: a new link in the sulfur cycle.甲基硫杆菌 nov. sp. 将二甲基硫醚氧化为连四硫酸盐：硫循环中的新环节。
Environ Microbiol. 2010 Oct;12(10):2688-99. doi: 10.1111/j.1462-2920.2010.02238.x.
6
Dissimilatory reduction of nitrate in seawater by a Methylophaga strain containing two highly divergent narG sequences.含有两个高度不同的 narG 序列的甲基球菌属菌株对海水中硝酸盐的异化还原。
ISME J. 2010 Oct;4(10):1302-13. doi: 10.1038/ismej.2010.47. Epub 2010 Apr 15.
7
Methylophaga aminisulfidivorans sp. nov., a restricted facultatively methylotrophic marine bacterium.氨基硫化物甲基噬菌新种，一种受限的兼性甲基营养型海洋细菌。
Int J Syst Evol Microbiol. 2007 Sep;57(Pt 9):2096-2101. doi: 10.1099/ijs.0.65139-0.
8
[Methylophaga murata sp. nov.: a haloalkaliphilic aerobic methylotroph from deteriorating marble].[Murata甲基嗜碱菌新种：一种来自变质大理石的嗜盐碱需氧甲基营养菌]
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