Suppr超能文献

肺炎链球菌 DprA 蛋白的结构-功能分析表明,二聚化对于在转化过程中将 RecA 重组酶加载到 DNA 上至关重要。

Structure-function analysis of pneumococcal DprA protein reveals that dimerization is crucial for loading RecA recombinase onto DNA during transformation.

机构信息

Institut de Biochimie et de Biophysique Moléculaire et Cellulaire, Université de Paris-Sud, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8619, Bât 430, 91405 Orsay Cedex, France.

出版信息

Proc Natl Acad Sci U S A. 2012 Sep 11;109(37):E2466-75. doi: 10.1073/pnas.1205638109. Epub 2012 Aug 17.

Abstract

Transformation promotes genome plasticity in bacteria via RecA-driven homologous recombination. In the gram-positive human pathogen Streptococcus pneumoniae, the transformasome a multiprotein complex, internalizes, protects, and processes transforming DNA to generate chromosomal recombinants. Double-stranded DNA is internalized as single strands, onto which the transformation-dedicated DNA processing protein A (DprA) ensures the loading of RecA to form presynaptic filaments. We report that the structure of DprA consists of the association of a sterile alpha motif domain and a Rossmann fold and that DprA forms tail-to-tail dimers. The isolation of DprA self-interaction mutants revealed that dimerization is crucial for the formation of nucleocomplexes in vitro and for genetic transformation. Residues important for DprA-RecA interaction also were identified and mutated, establishing this interaction as equally important for transformation. Positioning of key interaction residues on the DprA structure revealed an overlap of DprA-DprA and DprA-RecA interaction surfaces. We propose a model in which RecA interaction promotes rearrangement or disruption of the DprA dimer, enabling the subsequent nucleation of RecA and its polymerization onto ssDNA.

摘要

转化通过 RecA 驱动的同源重组促进细菌的基因组可塑性。在革兰氏阳性的人类病原体肺炎链球菌中,转化体是一种多蛋白复合物,它可以将转化 DNA 内化、保护和加工,从而产生染色体重组体。双链 DNA 被内化成单链,转化专用的 DNA 加工蛋白 A(DprA)确保 RecA 的加载,以形成前突触丝。我们报告说,DprA 的结构由一个无菌α基序结构域和一个 Rossmann 折叠组成,并且 DprA 形成尾对尾二聚体。DprA 自我相互作用突变体的分离表明,二聚化对于体外核复合物的形成和遗传转化至关重要。还鉴定并突变了对 DprA-RecA 相互作用重要的残基,确立了这种相互作用对转化同样重要。关键相互作用残基在 DprA 结构上的定位揭示了 DprA-DprA 和 DprA-RecA 相互作用表面的重叠。我们提出了一个模型,其中 RecA 相互作用促进 DprA 二聚体的重排或破坏,从而能够随后引发 RecA 的成核及其在 ssDNA 上的聚合。

相似文献

1
Structure-function analysis of pneumococcal DprA protein reveals that dimerization is crucial for loading RecA recombinase onto DNA during transformation.
Proc Natl Acad Sci U S A. 2012 Sep 11;109(37):E2466-75. doi: 10.1073/pnas.1205638109. Epub 2012 Aug 17.
2
Fine-tuning cellular levels of DprA ensures transformant fitness in the human pathogen Streptococcus pneumoniae.
Mol Microbiol. 2018 Sep;109(5):663-675. doi: 10.1111/mmi.14068. Epub 2018 Jul 31.
5
Molecular determinants of the DprA-RecA interaction for nucleation on ssDNA.
Nucleic Acids Res. 2014 Jun;42(11):7395-408. doi: 10.1093/nar/gku349. Epub 2014 Apr 29.
6
7
The RecA-directed recombination pathway of natural transformation initiates at chromosomal replication forks in the pneumococcus.
Proc Natl Acad Sci U S A. 2023 Feb 21;120(8):e2213867120. doi: 10.1073/pnas.2213867120. Epub 2023 Feb 16.
8
Direct involvement of DprA, the transformation-dedicated RecA loader, in the shut-off of pneumococcal competence.
Proc Natl Acad Sci U S A. 2013 Mar 12;110(11):E1035-44. doi: 10.1073/pnas.1219868110. Epub 2013 Feb 25.
10
Bacillus subtilis RecA with DprA-SsbA antagonizes RecX function during natural transformation.
Nucleic Acids Res. 2017 Sep 6;45(15):8873-8885. doi: 10.1093/nar/gkx583.

引用本文的文献

1
A Single DNA Binding Site of DprA Dimer Is Required to Facilitate RecA Filament Nucleation.
Int J Mol Sci. 2025 Aug 15;26(16):7873. doi: 10.3390/ijms26167873.
4
DprA recruits ComM to facilitate recombination during natural transformation in Gram-negative bacteria.
Proc Natl Acad Sci U S A. 2025 Apr 15;122(15):e2421764122. doi: 10.1073/pnas.2421764122. Epub 2025 Apr 11.
5
Natural transformation-specific DprA coordinate DNA double-strand break repair pathways in heavily irradiated .
Appl Environ Microbiol. 2024 Feb 21;90(2):e0194823. doi: 10.1128/aem.01948-23. Epub 2024 Jan 9.
6
DNA Transport through the Dynamic Type IV Secretion System.
Infect Immun. 2023 Jul 18;91(7):e0043622. doi: 10.1128/iai.00436-22. Epub 2023 Jun 20.
7
(Competence) Operon Is Regulated by CcpA in Streptococcus pneumoniae D39.
Microbiol Spectr. 2023 Jun 15;11(3):e0001223. doi: 10.1128/spectrum.00012-23. Epub 2023 Apr 10.
8
The RecA-directed recombination pathway of natural transformation initiates at chromosomal replication forks in the pneumococcus.
Proc Natl Acad Sci U S A. 2023 Feb 21;120(8):e2213867120. doi: 10.1073/pnas.2213867120. Epub 2023 Feb 16.
9
The acquisition of clinically relevant amoxicillin resistance in Streptococcus pneumoniae requires ordered horizontal gene transfer of four loci.
PLoS Pathog. 2022 Jul 25;18(7):e1010727. doi: 10.1371/journal.ppat.1010727. eCollection 2022 Jul.
10
Expanding natural transformation to improve beneficial lactic acid bacteria.
FEMS Microbiol Rev. 2022 Jul 20;46(4). doi: 10.1093/femsre/fuac014.

本文引用的文献

2
Rapid pneumococcal evolution in response to clinical interventions.
Science. 2011 Jan 28;331(6016):430-4. doi: 10.1126/science.1198545.
4
The Significance of Pneumococcal Types.
J Hyg (Lond). 1928 Jan;27(2):113-59. doi: 10.1017/s0022172400031879.
5
The genetic transformation machinery: composition, localization, and mechanism.
FEMS Microbiol Rev. 2009 May;33(3):643-56. doi: 10.1111/j.1574-6976.2009.00164.x. Epub 2009 Feb 18.
6
RecA family proteins in archaea: RadA and its cousins.
Biochem Soc Trans. 2009 Feb;37(Pt 1):102-7. doi: 10.1042/BST0370102.
7
RecBCD enzyme and the repair of double-stranded DNA breaks.
Microbiol Mol Biol Rev. 2008 Dec;72(4):642-71, Table of Contents. doi: 10.1128/MMBR.00020-08.
8
Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks.
EMBO J. 2007 Oct 3;26(19):4239-51. doi: 10.1038/sj.emboj.7601848. Epub 2007 Sep 13.
10
Identification of the major protein component of the pneumococcal eclipse complex.
J Bacteriol. 2007 Sep;189(17):6497-500. doi: 10.1128/JB.00687-07. Epub 2007 Jun 29.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验