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从欧洲亚硝化单胞菌 ADP-葡萄糖焦磷酸化酶独特的动力学和调节特性中对化能自养细菌糖原代谢的深入了解。

Insights into glycogen metabolism in chemolithoautotrophic bacteria from distinctive kinetic and regulatory properties of ADP-glucose pyrophosphorylase from Nitrosomonas europaea.

机构信息

Laboratorio de Enzimología Molecular, Instituto de Agrobiotecnología del Litoral, UNL-CONICET, FBCB-UNL, Santa Fe, Argentina.

出版信息

J Bacteriol. 2012 Nov;194(22):6056-65. doi: 10.1128/JB.00810-12. Epub 2012 Sep 7.

DOI:10.1128/JB.00810-12
PMID:22961847
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3486394/
Abstract

Nitrosomonas europaea is a chemolithoautotroph that obtains energy by oxidizing ammonia in the presence of oxygen and fixes CO(2) via the Benson-Calvin cycle. Despite its environmental and evolutionary importance, very little is known about the regulation and metabolism of glycogen, a source of carbon and energy storage. Here, we cloned and heterologously expressed the genes coding for two major putative enzymes of the glycogen synthetic pathway in N. europaea, ADP-glucose pyrophosphorylase and glycogen synthase. In other bacteria, ADP-glucose pyrophosphorylase catalyzes the regulatory step of the synthetic pathway and glycogen synthase elongates the polymer. In starch synthesis in plants, homologous enzymes play similar roles. We purified to homogeneity the recombinant ADP-glucose pyrophosphorylase from N. europaea and characterized its kinetic, regulatory, and oligomeric properties. The enzyme was allosterically activated by pyruvate, oxaloacetate, and phosphoenolpyruvate and inhibited by AMP. It had a broad thermal and pH stability and used different divalent metal ions as cofactors. Depending on the cofactor, the enzyme was able to accept different nucleotides and sugar phosphates as alternative substrates. However, characterization of the recombinant glycogen synthase showed that only ADP-Glc elongates the polysaccharide, indicating that ATP and glucose-1-phosphate are the physiological substrates of the ADP-glucose pyrophosphorylase. The distinctive properties with respect to selectivity for substrates and activators of the ADP-glucose pyrophosphorylase were in good agreement with the metabolic routes operating in N. europaea, indicating an evolutionary adaptation. These unique properties place the enzyme in a category of its own within the family, highlighting the unique regulation in these organisms.

摘要

欧洲亚硝化单胞菌是一种化能自养生物,它在有氧条件下通过氧化氨获得能量,并通过本森-卡尔文循环固定 CO(2)。尽管其具有环境和进化重要性,但对于糖原的调控和代谢知之甚少,糖原是一种碳源和能量储存物质。在这里,我们克隆并异源表达了欧洲亚硝化单胞菌中糖原合成途径的两个主要假定酶的编码基因,即 ADP-葡萄糖焦磷酸化酶和糖原合酶。在其他细菌中,ADP-葡萄糖焦磷酸化酶催化合成途径的调节步骤,而糖原合酶延长聚合物。在植物的淀粉合成中,同源酶发挥类似的作用。我们从欧洲亚硝化单胞菌中纯化成均相的重组 ADP-葡萄糖焦磷酸化酶,并对其动力学、调控和寡聚性质进行了表征。该酶被丙酮酸、草酰乙酸和磷酸烯醇丙酮酸别构激活,并被 AMP 抑制。它具有广泛的热稳定性和 pH 稳定性,并使用不同的二价金属离子作为辅助因子。根据辅助因子的不同,该酶能够接受不同的核苷酸和糖磷酸作为替代底物。然而,重组糖原合酶的表征表明只有 ADP-Glc 延长多糖,表明 ATP 和葡萄糖-1-磷酸是 ADP-葡萄糖焦磷酸化酶的生理底物。该酶对底物和激活剂的选择性的独特特性与欧洲亚硝化单胞菌中的代谢途径一致,表明了一种进化适应。这些独特的特性使该酶在该家族中自成一类,突出了这些生物体中独特的调控。

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