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海洋箭形藻(Sagittula marina),从海水中分离得到,属 Sagittula 的描述作修正。

Sagittula marina sp. nov., isolated from seawater and emended description of the genus Sagittula.

机构信息

Department of Chemical Engineering, Pohang University of Science and Technology, San 31, Hyoja-Dong, Pohang 790-784, Republic of Korea.

Gyeongbuk Sea Grant Institute, Pohang University of Science and Technology, San 31, Hyoja-Dong, Pohang 790-784, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Jun;63(Pt 6):2101-2107. doi: 10.1099/ijs.0.040766-0. Epub 2012 Oct 19.

Abstract

A novel bacterium, designated strain F028-2(T), was isolated from seawater at Damupo beach in Pohang, Korea, and investigated in a taxonomic study using a polyphasic approach. This novel strain was strictly aerobic, non-motile, Gram-stain-negative and rod-shaped, and occasionally formed aggregates. The temperature, pH and NaCl ranges for growth were 4-30 °C, pH 6.5-9.0 and 1-7% (w/v), respectively. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain F028-2(T) formed a lineage within the family Rhodobacteraceae of the class Alphaproteobacteria, and was closely related to members of the genera Sagittula and Antarctobacter with 96.3-96.4% sequence similarities. The polar lipid profile of strain F028-2(T) comprised diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, two unidentified aminolipids, one unidentified phospholipid and six unidentified lipids. The predominant cellular fatty acids were C18:1ω7c and C12:1 3-OH. The genomic DNA G+C content of strain F028-2(T) was 61.6 mol% and the major respiratory quinone was Q-10. Based on phenotypic, phylogenetic and genotypic data, strain F028-2(T) is considered to represent a novel species in the genus Sagittula, for which the name Sagittula marina sp. nov. is proposed. The type strain is F028-2(T) (=KCTC 23543(T)=JCM 17627(T)). An emended description of the genus Sagittula is also proposed.

摘要

一株新型细菌,命名为 F028-2(T) 株,从韩国浦项市 Damupo 海滩的海水中分离得到,并用多相分类法进行了分类学研究。该新菌株是严格需氧的、非运动的、革兰氏阴性的杆状的,偶尔形成聚集体。生长的温度、pH 和 NaCl 范围分别为 4-30°C、pH 6.5-9.0 和 1-7%(w/v)。基于 16S rRNA 基因序列的系统发育分析表明,F028-2(T) 株在α变形菌纲的红杆菌科内形成一个分支,与 Sagittula 和 Antarctobacter 属的成员密切相关,序列相似度为 96.3-96.4%。F028-2(T) 株的极性脂谱由二磷脂酰甘油、磷脂酰胆碱、磷脂酰乙醇胺、磷脂酰甘油、两种未鉴定的胺脂、一种未鉴定的磷脂和六种未鉴定的脂组成。主要的细胞脂肪酸为 C18:1ω7c 和 C12:1 3-OH。F028-2(T) 株的基因组 DNA G+C 含量为 61.6mol%,主要的呼吸醌为 Q-10。基于表型、系统发育和基因型数据,F028-2(T) 株被认为代表 Sagittula 属的一个新型种,提议命名为海洋 Sagittula 新种。模式菌株为 F028-2(T)(=KCTC 23543(T)=JCM 17627(T))。还提出了 Sagittula 属的修订描述。

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