Centre for Complexity Science, Zeeman Building, University of Warwick, Coventry, United Kingdom.
PLoS Comput Biol. 2012;8(11):e1002723. doi: 10.1371/journal.pcbi.1002723. Epub 2012 Nov 1.
The availability of epidemiological data in the early stages of an outbreak of an infectious disease is vital for modelers to make accurate predictions regarding the likely spread of disease and preferred intervention strategies. However, in some countries, the necessary demographic data are only available at an aggregate scale. We investigated the ability of models of livestock infectious diseases to predict epidemic spread and obtain optimal control policies in the event of imperfect, aggregated data. Taking a geographic information approach, we used land cover data to predict UK farm locations and investigated the influence of using these synthetic location data sets upon epidemiological predictions in the event of an outbreak of foot-and-mouth disease. When broadly classified land cover data were used to create synthetic farm locations, model predictions deviated significantly from those simulated on true data. However, when more resolved subclass land use data were used, moderate to highly accurate predictions of epidemic size, duration and optimal vaccination and ring culling strategies were obtained. This suggests that a geographic information approach may be useful where individual farm-level data are not available, to allow predictive analyses to be carried out regarding the likely spread of disease. This method can also be used for contingency planning in collaboration with policy makers to determine preferred control strategies in the event of a future outbreak of infectious disease in livestock.
传染病爆发初期的流行病学数据对于建模者做出关于疾病可能传播和首选干预策略的准确预测至关重要。然而,在一些国家,必要的人口统计数据只能以总体规模获得。我们研究了家畜传染病模型在存在不完善的、汇总数据的情况下预测疫情传播和获得最佳控制策略的能力。我们采用地理信息方法,使用土地覆盖数据来预测英国农场的位置,并研究了在口蹄疫爆发时使用这些合成位置数据集对流行病学预测的影响。当使用广义分类的土地覆盖数据来创建合成农场位置时,模型预测与真实数据模拟的结果有很大的偏差。然而,当使用更精细的土地利用子类数据时,能够获得对疫情规模、持续时间和最佳疫苗接种和环舍扑杀策略的中度至高度准确预测。这表明,在无法获得个别农场级数据的情况下,地理信息方法可能有助于进行关于疾病可能传播的预测分析。该方法还可与决策者合作,用于应急规划,以确定在未来发生家畜传染病爆发时的首选控制策略。