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RCSB 蛋白质数据库:研究和教育的新资源。

The RCSB Protein Data Bank: new resources for research and education.

机构信息

San Diego Supercomputer Center, University of California San Diego, La Jolla, CA 92093-0743, USA.

出版信息

Nucleic Acids Res. 2013 Jan;41(Database issue):D475-82. doi: 10.1093/nar/gks1200. Epub 2012 Nov 27.


DOI:10.1093/nar/gks1200
PMID:23193259
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3531086/
Abstract

The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) develops tools and resources that provide a structural view of biology for research and education. The RCSB PDB web site (http://www.rcsb.org) uses the curated 3D macromolecular data contained in the PDB archive to offer unique methods to access, report and visualize data. Recent activities have focused on improving methods for simple and complex searches of PDB data, creating specialized access to chemical component data and providing domain-based structural alignments. New educational resources are offered at the PDB-101 educational view of the main web site such as Author Profiles that display a researcher's PDB entries in a timeline. To promote different kinds of access to the RCSB PDB, Web Services have been expanded, and an RCSB PDB Mobile application for the iPhone/iPad has been released. These improvements enable new opportunities for analyzing and understanding structure data.

摘要

研究合作结构生物信息学蛋白质数据库(RCSB PDB)开发工具和资源,为研究和教育提供生物学的结构视图。RCSB PDB 网站(http://www.rcsb.org)使用 PDB 档案中经过策展的 3D 大分子数据,提供独特的方法来访问、报告和可视化数据。最近的活动重点是改进 PDB 数据的简单和复杂搜索方法,创建专门访问化学组件数据的方法,并提供基于域的结构比对。在主网站的 PDB-101 教育视图中提供了新的教育资源,例如作者简介,以时间线形式展示研究人员的 PDB 条目。为了促进对 RCSB PDB 的不同访问方式,已经扩展了 Web 服务,并发布了适用于 iPhone/iPad 的 RCSB PDB 移动应用程序。这些改进为分析和理解结构数据提供了新的机会。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/23e165fdc0f6/gks1200f4p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/1d272eea8856/gks1200f1p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/0959612f68e5/gks1200f2p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/d1688116172a/gks1200f3p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/23e165fdc0f6/gks1200f4p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/1d272eea8856/gks1200f1p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/0959612f68e5/gks1200f2p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/d1688116172a/gks1200f3p.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26fe/3531086/23e165fdc0f6/gks1200f4p.jpg

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本文引用的文献

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