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东海海洋 α 变形菌属硝酸还原菌的新种。

Pelagibacterium nitratireducens sp.nov., a marine Alphaproteobacterium isolated from the East China Sea.

机构信息

State Key Laboratory for Marine Environmental Science, Xiamen University, Xiamen 361005, People's Republic of China.

出版信息

Curr Microbiol. 2013 May;66(5):450-5. doi: 10.1007/s00284-012-0299-9. Epub 2013 Jan 9.

DOI:10.1007/s00284-012-0299-9
PMID:23299946
Abstract

A Gram-negative, rod-shaped, non-spore-forming aerobic bacterium, motile with a single polar flagellum, strain JLT2005(T), was isolated from surface seawater collected from the East China Sea and formed ivory white colonies on a rich organic medium. The strain was positive for catalase, oxidase, and urease. It grew in the presence of 0-12 % (w/v) NaCl (optimum 5 %), at 20-35 °C (optimum 25 °C), or at pH 6-10 (optimum pH 9). The major fatty acids (>10 %) were C(18:1)ω7c, C(19:0)ω8c cyclo, C(16:0), and C(18:0). The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol, and five unidentified glycolipids. Ubiquinone-10 and Ubiquinone-11 were present as the major quinones. The DNA G+C content was 74.3 mol%. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain JLT2005(T) belongs to the genus Pelagibacterium in the family Hyphomicrobiaceae, class Alphaproteobacteria. The closest neighbors were Pelagibacterium halotolerans B2(T) (98.7 % similarity) and Pelagibacterium luteolum 1_C16_27(T) (97.1 % similarity). DNA-DNA relatedness values of strain JLT2005(T) with P. halotolerans B2(T) and with P. luteolum 1_C16_27(T) were 31.6 and 25 %. Evidence from genotypic, chemotaxonomic, and phenotypic data shows that strain JLT2005(T) represents a novel species of the genus Pelagibacterium, for which the name Pelagibacterium nitratireducens sp. nov is proposed. The type strain is JLT2005(T) (=CGMCC 1.10829(T) =JCM 17767(T)).

摘要

一株革兰氏阴性、杆状、不产芽孢的需氧细菌,单极鞭毛运动,从东海采集的表层海水中分离得到,在富含有机物的培养基上形成乳白色菌落。该菌株过氧化氢酶、氧化酶和脲酶均为阳性。它可以在 0-12%(w/v)NaCl(最佳 5%)、20-35°C(最佳 25°C)或 pH6-10(最佳 pH9)的条件下生长。主要脂肪酸(>10%)为 C(18:1)ω7c、C(19:0)ω8c 环、C(16:0)和 C(18:0)。主要极性脂为磷脂酰甘油、双磷脂酰甘油和五种未知的糖脂。存在泛醌-10 和泛醌-11 作为主要的醌类。DNA G+C 含量为 74.3mol%。基于 16S rRNA 基因序列的系统发育分析表明,菌株 JLT2005(T)属于噬菌藻类海杆菌科的噬菌杆菌属,α变形菌纲。最接近的近缘种是耐盐噬菌杆菌 B2(T)(98.7%相似度)和黄杆菌 1_C16_27(T)(97.1%相似度)。菌株 JLT2005(T)与 P. halotolerans B2(T)和 P. luteolum 1_C16_27(T)的 DNA-DNA 相关值分别为 31.6%和 25%。基因型、化学分类和表型数据的证据表明,菌株 JLT2005(T)代表噬菌杆菌属的一个新种,命名为硝酸还原噬菌杆菌 Pelagibacterium nitratireducens sp. nov。模式菌株为 JLT2005(T)=CGMCC 1.10829(T)=JCM 17767(T)。

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