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盐沼盐杆菌属(Pelagibacterium halotolerans),新属,盐沼盐杆菌(Pelagibacterium halotolerans)种,新种,黄杆菌科的新成员。

Pelagibacterium halotolerans gen. nov., sp. nov. and Pelagibacterium luteolum sp. nov., novel members of the family Hyphomicrobiaceae.

机构信息

Second Institute of Oceanography, State Oceanic Administration, Hangzhou 310012, People's Republic of China.

Laboratory of Marine Ecosystem and Biogeochemistry, State Oceanic Administration, Hangzhou 310012, People's Republic of China.

出版信息

Int J Syst Evol Microbiol. 2011 Aug;61(Pt 8):1817-1822. doi: 10.1099/ijs.0.023325-0. Epub 2010 Sep 3.

Abstract

Two Gram-negative, motile, aerobic bacterial strains, designated B2(T) and 1_C16_27(T), were respectively isolated from a seawater sample collected from the East China Sea and a semi-coke sample from north-eastern Estonia. Their genetic, phenotypic and chemotaxonomic properties were studied. The isolates were short rods with polar flagella and were positive for catalase and oxidase activities. Q-10 was the predominant respiratory ubiquinone. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol and two unidentified glycolipids. The major fatty acids were nonadecanoic (C(19 : 0) cyclo), octadecanoic (C(18 : 0) and C(18 : 0) 3-OH), octadecenoic (C(18 : 1)) and hexadecanoic (C(16 : 0)) acids. The G+C content of the genomic DNA was 58.1-59.3 mol%. 16S rRNA gene sequence analysis revealed that the two isolates represent a distinct lineage within the family Hyphomicrobiaceae. The phylogenetically closest relatives were Cucumibacter (92.7-93.7 % 16S rRNA gene sequence similarity), Devosia (92.9-94.4 %) and Zhangella (91.7-92.1 %). Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strains B2(T) and 1_C16_27(T) could be differentiated from each other and from members of the genera Cucumibacter, Devosia and Zhangella. Therefore, it is proposed that strains B2(T) and 1_C16_27(T) represent two novel species in a new genus, for which the names Pelagibacterium halotolerans gen. nov., sp. nov. (the type species; type strain B2(T)  = CGMCC 1.7692(T)  = JCM 15775(T)) and Pelagibacterium luteolum sp. nov. (type strain 1_C16_27(T)  = CGMCC 1.10267(T)  = JCM 16552(T)  = CELMS EEUT 1C1627(T)) are proposed.

摘要

两株革兰氏阴性、运动、需氧细菌菌株,分别命名为 B2(T) 和 1_C16_27(T),分别从东海海水样本和来自东北爱沙尼亚的半焦样本中分离得到。研究了它们的遗传、表型和化学分类学特性。这些分离物是具有极性鞭毛的短杆菌,过氧化氢酶和氧化酶活性均为阳性。Q-10 是主要的呼吸泛醌。主要的极性脂是磷脂酰甘油、双磷脂酰甘油和两种未鉴定的糖脂。主要脂肪酸是非十九烷酸(C(19 : 0) 环)、十八烷酸(C(18 : 0) 和 C(18 : 0) 3-OH)、十八烯酸(C(18 : 1))和十六烷酸(C(16 : 0))。基因组 DNA 的 G+C 含量为 58.1-59.3 mol%。16S rRNA 基因序列分析表明,这两个分离物代表了噬氢菌科中的一个独特谱系。与亲缘关系最近的是 Cucumibacter(92.7-93.7% 16S rRNA 基因序列相似性)、Devosia(92.9-94.4%)和 Zhangella(91.7-92.1%)。表型差异特征以及系统发育和遗传独特性表明,菌株 B2(T) 和 1_C16_27(T) 彼此之间以及与 Cucumibacter、Devosia 和 Zhangella 属的成员都可以区分开来。因此,建议菌株 B2(T) 和 1_C16_27(T) 代表一个新属中的两个新种,该属命名为 Pelagibacterium halotolerans gen. nov.,sp. nov.(模式种;模式菌株 B2(T)  = CGMCC 1.7692(T)  = JCM 15775(T)) 和 Pelagibacterium luteolum sp. nov.(模式菌株 1_C16_27(T)  = CGMCC 1.10267(T)  = JCM 16552(T)  = CELMS EEUT 1C1627(T))。

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