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耐盐根瘤菌属新种,从氯乙烯污染土壤中分离得到。

Rhizobium halotolerans sp. nov., Isolated from chloroethylenes contaminated soil.

机构信息

Division of Natural Science, Department of Bio-engineering, Kyonggi University, 94-6 Iui-dong Yeongtong-gu, Suwon 433-760, Republic of Korea.

出版信息

Curr Microbiol. 2013 Jun;66(6):599-605. doi: 10.1007/s00284-013-0313-x. Epub 2013 Feb 3.

Abstract

The strain designated as AB21(T) was isolated from chloroethylenes contaminated soil. Cells are gram-negative, aerobic, non-spore-forming, and motile rods. Phylogenetic analysis based on 16S rRNA gene sequence showed that it belonged to the genus Rhizobium, and was closely related to Rhizobium sullae IS 123(T) (97.4 %), Rhizobium yanglingense SH 22623(T) (97.2 %), Rhizobium gallicum R 602sp(T) (97.1 %), Rhizobium alamii GBV 016(T) (97.0 %), and Rhizobium monogolense USDA 1844(T) (97.0 %). It showed less than 97 % identity with the remaining Rhizobium species. This novel isolate grew optimally at 25-37 °C (optimum, 30 °C) and pH 6-9 (optimum, pH 8.0). It grew in the presence of 0-4 % (w/v) NaCl, tolerating a 4 % (w/v) NaCl. DNA-DNA hybridization experiment shows less than 53 % binding with closely related Rhizobium. Predominant quinone is ubiquinone (Q-10). The major fatty acids were summed feature 8 (composed of C(18:1) ω7c/C(18:1) ω6c), C(19:0) cyclo ω8c, and C(16:0). The G+C molar content is 62.5 mol%. Based on the polyphasic analysis, strain AB21(T) is referred to be a novel species of the genus Rhizobium for which the name Rhizobium halotolerans sp. nov. is proposed. The type strain is AB21(T) (=KEMC 224-056(T) = JCM 17536(T)).

摘要

AB21(T) 菌株从氯乙烯污染土壤中分离得到。细胞呈革兰氏阴性、需氧、不产芽孢、运动杆状。基于 16S rRNA 基因序列的系统发育分析表明,它属于根瘤菌属,与苏莱氏根瘤菌 IS 123(T)(97.4%)、杨凌根瘤菌 SH 22623(T)(97.2%)、加利福尼亚根瘤菌 R 602sp(T)(97.1%)、阿拉米氏根瘤菌 GBV 016(T)(97.0%)和蒙古根瘤菌 USDA 1844(T)(97.0%)最为密切相关。它与其余的根瘤菌种的相似度小于 97%。该新分离株在 25-37°C(最佳温度 30°C)和 pH6-9(最佳 pH8.0)条件下生长最佳。它可以在 0-4%(w/v)NaCl 存在下生长,耐受 4%(w/v)NaCl。DNA-DNA 杂交实验显示与密切相关的根瘤菌的结合率小于 53%。主要醌为泛醌(Q-10)。主要脂肪酸为 summed feature 8(由 C(18:1) ω7c/C(18:1) ω6c)、C(19:0) 环 ω8c 和 C(16:0) 组成。G+C 摩尔含量为 62.5 mol%。基于多相分析,菌株 AB21(T) 被认为是根瘤菌属的一个新种,建议命名为耐盐根瘤菌 Rhizobium halotolerans sp. nov.。模式菌株为 AB21(T)(=KEMC 224-056(T)=JCM 17536(T))。

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