Department of Biochemistry, University of Oxford, Oxford, United Kingdom.
Biophys J. 2013 Feb 5;104(3):613-21. doi: 10.1016/j.bpj.2012.12.002.
Phosphatase and tensin-homolog deleted on chromosome 10 (PTEN) is a tumor-suppressor protein that regulates phosphatidylinositol 3-kinase (PI3-K) signaling by binding to the plasma membrane and hydrolyzing the 3' phosphate from phosphatidylinositol (3,4,5)-trisphosphate (PI(3,4,5)P3) to form phosphatidylinositol (4,5)-bisphosphate (PI(4,5)P2). Several loss-of-function mutations in PTEN that impair lipid phosphatase activity and membrane binding are oncogenic, leading to the development of a variety of cancers, but information about the membrane-associated state of PTEN remains sparse. We have modeled a membrane-associated state of the truncated PTEN structure bound to PI(3,4,5)P3 via multiscale molecular dynamics simulations. We show that the location of the membrane-binding surface agrees with experimental observations and is robust to changes in lipid composition. The level of membrane interaction is substantially reduced in the phosphatase domain for the triple mutant R161E/K163E/K164E, in line with experimental results. We observe clustering of anionic lipids around the C2 domain in preference to the phosphatase domain, suggesting that the C2 domain is involved in nonspecific interactions with negatively charged lipid headgroups. Finally, our simulations suggest that the oncogenicity of the R335L mutation may be due to a reduction in the interaction of the mutant PTEN with anionic lipids.
第 10 号染色体缺失的磷酸酶及张力蛋白同源物(PTEN)是一种肿瘤抑制蛋白,通过与质膜结合并水解磷脂酰肌醇(3,4,5)-三磷酸(PI(3,4,5)P3)的 3' 磷酸,来调节磷脂酰肌醇 3-激酶(PI3-K)信号。PTEN 的几种失活功能突变会损害脂质磷酸酶活性和膜结合,从而导致多种癌症的发生,但关于 PTEN 膜相关状态的信息仍然很少。我们通过多尺度分子动力学模拟构建了与 PI(3,4,5)P3 结合的截断 PTEN 结构的膜相关状态模型。我们发现,膜结合表面的位置与实验观察结果一致,并且对脂质组成的变化具有鲁棒性。对于三重突变体 R161E/K163E/K164E,磷酸酶结构域的膜相互作用水平大大降低,这与实验结果一致。我们观察到带负电荷的脂质在 C2 结构域周围聚集,而不是在磷酸酶结构域周围聚集,这表明 C2 结构域参与与带负电荷的脂质头基的非特异性相互作用。最后,我们的模拟表明,R335L 突变的致癌性可能是由于突变的 PTEN 与阴离子脂质的相互作用减少所致。