丁醇高产菌株丙酮丁醇梭菌N1-4的基因组序列
Genome Sequence of the Butanol Hyperproducer Clostridium saccharoperbutylacetonicum N1-4.
作者信息
Del Cerro Carlos, Felpeto-Santero Carmen, Rojas Antonia, Tortajada Marta, Ramón Daniel, García José L
机构信息
Environmental Biology, Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas, Madrid, Spain.
出版信息
Genome Announc. 2013 Mar 7;1(2):e0007013. doi: 10.1128/genomeA.00070-13.
Abstract
Clostridium saccharoperbutylacetonicum is one of the most important acetone-butanol-ethanol (ABE)-generating industrial microorganisms and one of the few bacteria containing choline in its cell wall. Here, we report the draft genome sequence of C. saccharoperbutylacetonicum strain N1-4 (6.6 Mbp; G+C content, 29.4%) and the findings obtained from the annotation of the genome.
摘要
丙酮丁醇梭菌是最重要的产丙酮-丁醇-乙醇（ABE）的工业微生物之一，也是少数细胞壁中含有胆碱的细菌之一。在此，我们报告了丙酮丁醇梭菌N1-4菌株的基因组草图序列（660万碱基对；G+C含量为29.4%）以及从该基因组注释中获得的研究结果。
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2
Economical challenges to microbial producers of butanol: feedstock, butanol ratio and titer.微生物丁醇生产者面临的经济挑战：原料、丁醇比例和产率。
Biotechnol J. 2011 Nov;6(11):1348-57. doi: 10.1002/biot.201100046.
3
Butanol production from crystalline cellulose by cocultured Clostridium thermocellum and Clostridium saccharoperbutylacetonicum N1-4.利用共培养的热纤梭菌和产丁醇梭菌 N1-4 从结晶纤维素生产丁醇。
Appl Environ Microbiol. 2011 Sep;77(18):6470-5. doi: 10.1128/AEM.00706-11. Epub 2011 Jul 15.
4
Efficient conversion of lactic acid to butanol with pH-stat continuous lactic acid and glucose feeding method by Clostridium saccharoperbutylacetonicum.利用 pH -stat 连续乳酸和葡萄糖进料法，通过产丁醇梭菌高效转化乳酸为丁醇。
Appl Microbiol Biotechnol. 2010 Jul;87(3):1177-85. doi: 10.1007/s00253-010-2673-5. Epub 2010 May 26.
5
Shifting the genomic gold standard for the prokaryotic species definition.动摇原核生物种定义的基因组黄金标准。
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6
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Appl Biochem Biotechnol. 2010 May;161(1-8):157-70. doi: 10.1007/s12010-009-8770-1. Epub 2009 Sep 22.
7
Versatility of choline metabolism and choline-binding proteins in Streptococcus pneumoniae and commensal streptococci.肺炎链球菌和共生链球菌中胆碱代谢及胆碱结合蛋白的多功能性
FEMS Microbiol Rev. 2009 May;33(3):572-86. doi: 10.1111/j.1574-6976.2009.00172.x.
8
Fermentative butanol production: bulk chemical and biofuel.发酵法生产丁醇：大宗化学品和生物燃料。
Ann N Y Acad Sci. 2008 Mar;1125:353-62. doi: 10.1196/annals.1419.009.
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The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
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