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尼氏蛭弧菌和尼氏蛭弧菌,从药用蛭类宽体金线蛭中分离得到。

Niabella hirudinis and Niabella drilacis sp. nov., isolated from the medicinal leech Hirudo verbana.

机构信息

Institut für Angewandte Mikrobiologie, Justus-Liebig-Universität Giessen, D-35392 Giessen, Germany.

Biebertaler Blutegelzucht, D-35444 Biebertal, Germany.

出版信息

Int J Syst Evol Microbiol. 2013 Sep;63(Pt 9):3487-3493. doi: 10.1099/ijs.0.050823-0. Epub 2013 Mar 29.

Abstract

Two Gram-negative, rod-shaped bacteria, strains E96(T) and E90(T), were isolated from medicinal leeches (Hirudo verbana) and characterized by a polyphasic taxonomic approach. Phylogenetic analysis based on the nearly full-length 16S rRNA gene sequence showed that the two strains shared 98.1% sequence similarity and were affiliated with the genus Niabella within the phylum Bacteroidetes, with 94.4-97.6% sequence similarity to type strains of species of the genus Niabella and highest sequence similarity to the type strain of Niabella aurantiaca (97.3 and 97.6%, respectively). Niabella-related 16S rRNA gene sequences were recently detected in the bladders of Hirudo verbana; however, no cultured representatives were so far available. Genomic fingerprint analysis using repetitive element primed (rep)- and randomly amplified polymorphic DNA (RAPD)-PCRs and DNA-DNA hybridization experiments clearly showed that the strains were different from each other (DNA-DNA relatedness values of 39.1%, reciprocal 28.0%) and from the type strains of N. aurantiaca (<19.7%) and Niabella tibetensis (<41.1%). Chemotaxonomic analyses confirmed the affiliation to the genus Niabella. Both strains contained MK-7 as the predominant menaquinone. The major fatty acids of both strains were iso-C15:0, iso-C15:1 G, iso-C17:0 3-OH and summed feature 3 (C16:1ω7c and/or iso-C15:0 2-OH), which is characteristic for the genus Niabella. Based on genotypic, chemotaxonomic and physiological characterization, we propose two novel species of the genus Niabella, Niabella hirudinis sp. nov., with strain E96(T) ( =DSM 25812(T) =CCM 8411(T) =LMG 26956(T)) as the type strain, and Niabella drilacis sp. nov., with strain E90(T) ( =DSM 25811(T) =CCM 8410(T) =LMG 26954(T)) as the type strain.

摘要

从医用水蛭(Hirudo verbana)中分离到两株革兰氏阴性、杆状细菌,菌株 E96(T) 和 E90(T),并通过多相分类方法进行了表征。基于近全长 16S rRNA 基因序列的系统发育分析表明,这两株菌的序列相似度为 98.1%,属于拟杆菌门的 Niabella 属,与 Niabella 属的种的模式菌株的序列相似度为 94.4-97.6%,与 Niabella aurantiaca 的模式菌株的序列相似度最高(分别为 97.3%和 97.6%)。最近在医用水蛭的膀胱中检测到了 Niabella 相关的 16S rRNA 基因序列,但目前还没有培养的代表。使用重复元件启动(rep)和随机扩增多态性 DNA(RAPD)-PCR 和 DNA-DNA 杂交实验进行的基因组指纹分析清楚地表明,这些菌株彼此不同(DNA-DNA 相关性值为 39.1%,相互为 28.0%),与 Niabella aurantiaca(<19.7%)和 Niabella tibetensis(<41.1%)的模式菌株也不同。化学分类分析证实了它们与 Niabella 属的归属关系。两株菌均含有 MK-7 作为主要的menaquinone。两株菌的主要脂肪酸均为 iso-C15:0、iso-C15:1 G、iso-C17:0 3-OH 和总和特征 3(C16:1ω7c 和/或 iso-C15:0 2-OH),这是 Niabella 属的特征。基于基因型、化学分类和生理特征,我们提出了 Niabella 属的两个新种,即 Niabella hirudinis sp. nov.,以菌株 E96(T)(=DSM 25812(T)=CCM 8411(T)=LMG 26956(T))为模式菌株,以及 Niabella drilacis sp. nov.,以菌株 E90(T)(=DSM 25811(T)=CCM 8410(T)=LMG 26954(T))为模式菌株。

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