Siddiqi Muhammad Zubair, Im Wan-Taek
Department of Biotechnology, Hankyong National University, 327 Chungang-no Anseong-si, Kyonggi-do 456-749, Republic of Korea.
Center for Genetic Information, Graduate School of Bio and Information Technology, Hankyoung National University, 327 Chungang-no Anseong-si, Kyonggi-do 456-749, Republic of Korea.
Int J Syst Evol Microbiol. 2016 Sep;66(8):2774-2779. doi: 10.1099/ijsem.0.001053. Epub 2016 Mar 31.
A Gram-reaction-negative, strictly aerobic, non-motile, yellow and rod-shaped bacterium (designated RP-2T) isolated from lake water, was characterized by a polyphasic approach to clarify its taxonomic position. Strain RP-2T was observed to grow optimally at 30 °C and at pH 7.0 on R2A medium. Phylogenetic analysis based on 16S rRNA gene sequences indicated that RP-2T represented a member of the genus Niabella of the family Chitinophagaceae and was most closely related to Niabella yanshanensis KACC 14980T (96.6 %), Niabella ginsengisoliKACC 13021T (96.5 %), Niabella drilacis DSM 25811T (95.7 %) and Niabella aurantiaca KACC 11698T (95.6 %). The DNA G+C content was 44.5 mol%. The major polar lipids were diphosphatidylglycerol (DPG) and phosphatidylethanolamine (PE). The predominant quinone was MK-7. The major fatty acids were iso-C15:0, iso-C15:1G, iso-C17:0 3-OH and summed feature 3 (comprising C16:1ω7c and/or C16:1ω6c) supported the affiliation of RP-2T to the genus Niabella. However, RP-2T could be distinguished genotypically and phenotypically from the species of the genus Niabella with validly published names. The novel isolate therefore represents a novel species, for which the name Niabella aquatica sp. nov. is proposed, with the type strain RP-2T (=KACC 18623T =JCM 30952T).
从湖水中分离出的一株革兰氏阴性、严格需氧、无运动性、黄色杆状细菌(命名为RP-2T),采用多相分类法对其进行表征以明确其分类地位。观察到菌株RP-2T在R2A培养基上于30°C和pH 7.0条件下生长最佳。基于16S rRNA基因序列的系统发育分析表明,RP-2T属于噬几丁质菌科尼亚贝拉属的一个成员,与燕山尼亚贝拉菌KACC 14980T(96.6%)、人参土尼亚贝拉菌KACC 13021T(96.5%)、蚯蚓尼亚贝拉菌DSM 25811T(95.7%)和橙色尼亚贝拉菌KACC 11698T(95.6%)关系最为密切。DNA G+C含量为44.5 mol%。主要极性脂为双磷脂酰甘油(DPG)和磷脂酰乙醇胺(PE)。主要醌为MK-7。主要脂肪酸为异-C15:0、异-C15:1G、异-C17:0 3-OH以及总和特征3(包含C16:1ω7c和/或C16:1ω6c),支持RP-2T属于尼亚贝拉属。然而,RP-2T在基因型和表型上可与已有效发表名称的尼亚贝拉属物种区分开来。因此,该新分离株代表一个新物种,提议将其命名为水生尼亚贝拉菌(Niabella aquatica sp. nov.),模式菌株为RP-2T(=KACC 18623T =JCM 30952T)。