Aix-Marseille Université, Unité de Recherche en Maladies Infectieuses et Tropicales Emergentes (URMITE), UM63, CNRS 7278, IRD 198, Inserm 1095, IHU Méditerranée Infection, Faculté de Médecine et de Pharmacie, Marseille, France.
PLoS One. 2013 Apr 19;8(4):e61428. doi: 10.1371/journal.pone.0061428. Print 2013.
Klebsiella pneumoniae is one of the most important pathogens responsible for nosocomial outbreaks worldwide. Epidemiological analyses are useful in determining the extent of an outbreak and in elucidating the sources and the spread of infections. The aim of this study was to investigate the epidemiological spread of K. pneumoniae strains using a MALDI-TOF MS approach.
Five hundred and thirty-five strains of K. pneumoniae were collected between January 2008 and March 2011 from hospitals in France and Algeria and were identified using MALDI-TOF. Antibiotic resistance patterns were investigated. Clinical and epidemiological data were recorded in an Excel file, including clustering obtained from the MSP dendrogram, and were analyzed using PASW Statistics software.
Antibiotic susceptibility and phenotypic tests of the 535 isolates showed the presence of six resistance profiles distributed unequally between the two countries. The MSP dendrogram revealed five distinct clusters according to an arbitrary cut-off at the distance level of 500. Data mining analysis of the five clusters showed that K. pneumoniae strains isolated in Algerian hospitals were significantly associated with respiratory infections and the ESBL phenotype, whereas those from French hospitals were significantly associated with urinary tract infections and the wild-type phenotype.
MALDI-TOF was found to be a promising tool to identify and differentiate between K. pneumoniae strains according to their phenotypic properties and their epidemiological distribution. This is the first time that MALDI-TOF has been used as a rapid tool for typing K. pneumoniae clinical isolates.
肺炎克雷伯菌是全球最重要的医院感染病原体之一。通过流行病学分析,可以确定疫情的严重程度,并阐明感染源和传播途径。本研究旨在使用 MALDI-TOF MS 方法研究肺炎克雷伯菌菌株的流行病学传播。
2008 年 1 月至 2011 年 3 月,从法国和阿尔及利亚的医院采集了 535 株肺炎克雷伯菌,使用 MALDI-TOF 进行鉴定。研究了抗生素耐药模式。临床和流行病学数据记录在 Excel 文件中,包括从 MSP 树状图获得的聚类,并使用 PASW Statistics 软件进行分析。
535 株分离株的药敏试验和表型试验显示,两种国家的 6 种耐药谱分布不均。MSP 树状图根据距离水平 500 的任意截断值显示了五个不同的聚类。五个聚类的数据挖掘分析显示,从阿尔及利亚医院分离的肺炎克雷伯菌菌株与呼吸道感染和 ESBL 表型显著相关,而从法国医院分离的菌株与尿路感染和野生型表型显著相关。
MALDI-TOF 被发现是一种很有前途的工具,可以根据其表型特性和流行病学分布来识别和区分肺炎克雷伯菌菌株。这是首次将 MALDI-TOF 用作肺炎克雷伯菌临床分离株快速分型的工具。