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在硫代硫酸盐氧化过程中,变形菌的 34S 动力学富集作用以及 SoxB 在 S-S 键断裂中的保守作用。

Kinetic enrichment of 34S during proteobacterial thiosulfate oxidation and the conserved role of SoxB in S-S bond breaking.

机构信息

Department of Microbiology, Bose Institute, Calcutta, India.

出版信息

Appl Environ Microbiol. 2013 Jul;79(14):4455-64. doi: 10.1128/AEM.00956-13. Epub 2013 May 17.

Abstract

During chemolithoautotrophic thiosulfate oxidation, the phylogenetically diverged proteobacteria Paracoccus pantotrophus, Tetrathiobacter kashmirensis, and Thiomicrospira crunogena rendered steady enrichment of (34)S in the end product sulfate, with overall fractionation ranging between -4.6‰ and +5.8‰. The fractionation kinetics of T. crunogena was essentially similar to that of P. pantotrophus, albeit the former had a slightly higher magnitude and rate of (34)S enrichment. In the case of T. kashmirensis, the only significant departure of its fractionation curve from that of P. pantotrophus was observed during the first 36 h of thiosulfate-dependent growth, in the course of which tetrathionate intermediate formation is completed and sulfate production starts. The almost-identical (34)S enrichment rates observed during the peak sulfate-producing stage of all three processes indicated the potential involvement of identical S-S bond-breaking enzymes. Concurrent proteomic analyses detected the hydrolase SoxB (which is known to cleave terminal sulfone groups from SoxYZ-bound cysteine S-thiosulfonates, as well as cysteine S-sulfonates, in P. pantotrophus) in the actively sulfate-producing cells of all three species. The inducible expression of soxB during tetrathionate oxidation, as well as the second leg of thiosulfate oxidation, by T. kashmirensis is significant because the current Sox pathway does not accommodate tetrathionate as one of its substrates. Notably, however, no other Sox protein except SoxB could be detected upon matrix-assisted laser desorption ionization mass spectrometry analysis of all such T. kashmirensis proteins as appeared to be thiosulfate inducible in 2-dimensional gel electrophoresis. Instead, several other redox proteins were found to be at least 2-fold overexpressed during thiosulfate- or tetrathionate-dependent growth, thereby indicating that there is more to tetrathionate oxidation than SoxB alone.

摘要

在化能自养硫代硫酸盐氧化过程中,系统发育上不同的变形杆菌 Paracoccus pantotrophus、Tetrathiobacter kashmirensis 和 Thiomicrospira crunogena 将(34)S 稳定地富集到终产物硫酸盐中,总分馏范围在-4.6‰至+5.8‰之间。T. crunogena 的分馏动力学与 P. pantotrophus 基本相似,尽管前者的(34)S 富集程度和速率略高。对于 T. kashmirensis,其分馏曲线与 P. pantotrophus 的唯一显著偏离仅发生在硫代硫酸盐依赖生长的前 36 小时,在此期间四硫代盐中间体形成完成,硫酸盐开始产生。在所有三个过程的峰值硫酸盐产生阶段观察到的几乎相同的(34)S 富集率表明,可能涉及相同的 S-S 键断裂酶。同时的蛋白质组学分析检测到在所有三种生物的活跃硫酸盐产生细胞中存在水解酶 SoxB(已知其在 P. pantotrophus 中从 SoxYZ 结合的半胱氨酸 S-连四硫酸盐以及半胱氨酸 S-亚磺酸盐中裂解末端亚砜基团)。T. kashmirensis 中硫代硫酸盐氧化和硫代硫酸盐氧化的第二阶段诱导 SoxB 的表达是重要的,因为当前的 Sox 途径不将四硫代盐作为其底物之一。然而,值得注意的是,在用基质辅助激光解吸电离质谱分析所有这些似乎在二维凝胶电泳中诱导硫代硫酸盐的 T. kashmirensis 蛋白质时,除了 SoxB 之外,没有检测到其他 Sox 蛋白。相反,在硫代硫酸盐或四硫代盐依赖生长过程中,发现几种其他氧化还原蛋白的表达至少增加了 2 倍,这表明四硫代盐氧化不仅仅是 SoxB 单独作用。

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