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前列腺癌的基因组格局

The genomic landscape of prostate cancer.

作者信息

Spans Lien, Clinckemalie Liesbeth, Helsen Christine, Vanderschueren Dirk, Boonen Steven, Lerut Evelyne, Joniau Steven, Claessens Frank

机构信息

Molecular Endocrinology Laboratory, Department of Cellular and Molecular Medicine, University of Leuven, Campus Gasthuisberg, Herestraat 49, P.O. Box 901, 3000 Leuven, Belgium.

出版信息

Int J Mol Sci. 2013 May 24;14(6):10822-51. doi: 10.3390/ijms140610822.

DOI:10.3390/ijms140610822
PMID:23708091
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3709705/
Abstract

By the age of 80, approximately 80% of men will manifest some cancerous cells within their prostate, indicating that prostate cancer constitutes a major health burden. While this disease is clinically insignificant in most men, it can become lethal in others. The most challenging task for clinicians is developing a patient-tailored treatment in the knowledge that this disease is highly heterogeneous and that relatively little adequate prognostic tools are available to distinguish aggressive from indolent disease. Next-generation sequencing allows a description of the cancer at an unprecedented level of detail and at different levels, going from whole genome or exome sequencing to transcriptome analysis and methylation-specific immunoprecipitation, followed by sequencing. Integration of all these data is leading to a better understanding of the initiation, progression and metastatic processes of prostate cancer. Ultimately, these insights will result in a better and more personalized treatment of patients suffering from prostate cancer. The present review summarizes current knowledge on copy number changes, gene fusions, single nucleotide mutations and polymorphisms, methylation, microRNAs and long non-coding RNAs obtained from high-throughput studies.

摘要

到80岁时,约80%的男性前列腺内会出现一些癌细胞,这表明前列腺癌构成了一项重大的健康负担。虽然这种疾病在大多数男性中临床意义不大,但在其他一些男性中可能会致命。临床医生面临的最具挑战性的任务是,在了解这种疾病高度异质性且相对缺乏足够的预后工具来区分侵袭性疾病和惰性疾病的情况下,制定针对患者的个性化治疗方案。新一代测序能够以前所未有的详细程度在不同层面描述癌症,从全基因组或外显子组测序到转录组分析以及甲基化特异性免疫沉淀,随后进行测序。整合所有这些数据有助于更好地理解前列腺癌的起始、进展和转移过程。最终,这些见解将使前列腺癌患者得到更好、更个性化的治疗。本综述总结了从高通量研究中获得的关于拷贝数变化、基因融合、单核苷酸突变和多态性、甲基化、微小RNA和长链非编码RNA的现有知识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7dcf/3709705/ff505544d03c/ijms-14-10822f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7dcf/3709705/f3f4e66391aa/ijms-14-10822f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7dcf/3709705/ff505544d03c/ijms-14-10822f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7dcf/3709705/f3f4e66391aa/ijms-14-10822f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7dcf/3709705/ff505544d03c/ijms-14-10822f2.jpg

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本文引用的文献

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Punctuated evolution of prostate cancer genomes.前列腺癌基因组的间断进化。
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Fine-mapping identifies multiple prostate cancer risk loci at 5p15, one of which associates with TERT expression.精细映射确定了多个位于 5p15 的前列腺癌风险位点,其中一个与 TERT 表达相关。
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Mapping the Germline and Somatic Mutation Interaction Landscape in Indolent and Aggressive Prostate Cancers.绘制惰性和侵袭性前列腺癌中的生殖系和体细胞突变相互作用图谱
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Identification of novel prostate cancer drivers using RegNetDriver: a framework for integration of genetic and epigenetic alterations with tissue-specific regulatory network.使用RegNetDriver鉴定新型前列腺癌驱动因素:一个将遗传和表观遗传改变与组织特异性调控网络整合的框架。
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Somatic Mutation Analyses in Studies of the Clonal Evolution and Diagnostic Targets of Prostate Cancer.前列腺癌克隆进化与诊断靶点研究中的体细胞突变分析
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Molecular Mechanism of -Catenin Signaling Pathway Inactivation in ETV1-Positive Prostate Cancers.ETV1 阳性前列腺癌中β-连环蛋白信号通路失活的分子机制
J Pharm Sci Pharmacol. 2015 Sep;2(3):208-216. doi: 10.1166/jpsp.2015.1069.
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Overexpression of USP39 predicts poor prognosis and promotes tumorigenesis of prostate cancer via promoting EGFR mRNA maturation and transcription elongation.USP39的过表达通过促进EGFR mRNA成熟和转录延伸来预测前列腺癌的不良预后并促进其肿瘤发生。
Oncotarget. 2016 Apr 19;7(16):22016-30. doi: 10.18632/oncotarget.7882.
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Evaluation of hGM-CSF/hTNFα surface-modified prostate cancer therapeutic vaccine in the huPBL-SCID chimeric mouse model.人GM-CSF/hTNFα表面修饰的前列腺癌治疗性疫苗在人外周血淋巴细胞-严重联合免疫缺陷嵌合小鼠模型中的评估
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CXCR4 is a novel target of cancer chemopreventative isothiocyanates in prostate cancer cells.CXCR4是前列腺癌细胞中癌症化学预防异硫氰酸盐的一个新靶点。
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Targeting the DNA-binding activity of the human ERG transcription factor using new heterocyclic dithiophene diamidines.利用新型杂环二噻吩二脒靶向人 ERG 转录因子的 DNA 结合活性。
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