• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

迈向基于任务的 fMRI 数据的开放共享:OpenfMRI 项目。

Toward open sharing of task-based fMRI data: the OpenfMRI project.

机构信息

Imaging Research Center, University of Texas Austin, TX, USA.

出版信息

Front Neuroinform. 2013 Jul 8;7:12. doi: 10.3389/fninf.2013.00012. eCollection 2013.

DOI:10.3389/fninf.2013.00012
PMID:23847528
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3703526/
Abstract

The large-scale sharing of task-based functional neuroimaging data has the potential to allow novel insights into the organization of mental function in the brain, but the field of neuroimaging has lagged behind other areas of bioscience in the development of data sharing resources. This paper describes the OpenFMRI project (accessible online at http://www.openfmri.org), which aims to provide the neuroimaging community with a resource to support open sharing of task-based fMRI studies. We describe the motivation behind the project, focusing particularly on how this project addresses some of the well-known challenges to sharing of task-based fMRI data. Results from a preliminary analysis of the current database are presented, which demonstrate the ability to classify between task contrasts with high generalization accuracy across subjects, and the ability to identify individual subjects from their activation maps with moderately high accuracy. Clustering analyses show that the similarity relations between statistical maps have a somewhat orderly relation to the mental functions engaged by the relevant tasks. These results highlight the potential of the project to support large-scale multivariate analyses of the relation between mental processes and brain function.

摘要

大规模共享基于任务的功能神经影像学数据有可能使我们对大脑中精神功能的组织有新的认识,但神经影像学领域在数据共享资源的开发方面落后于其他生物科学领域。本文描述了 OpenFMRI 项目(可在 http://www.openfmri.org 在线访问),该项目旨在为神经影像学社区提供一个资源,以支持基于任务的 fMRI 研究的开放共享。我们描述了项目背后的动机,特别关注该项目如何解决基于任务的 fMRI 数据共享的一些众所周知的挑战。目前数据库的初步分析结果表明,该项目具有在跨主体高泛化精度下对任务对比进行分类的能力,并且具有从中以中等精度识别个体主体的能力。聚类分析表明,统计映射之间的相似关系与相关任务所涉及的精神功能之间存在有序关系。这些结果突出了该项目支持大规模多元分析精神过程与大脑功能之间关系的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/3ba9f0936f60/fninf-07-00012-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/91bf6a0f0869/fninf-07-00012-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/ca9ef893224c/fninf-07-00012-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/8ebd795213f3/fninf-07-00012-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/3ba9f0936f60/fninf-07-00012-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/91bf6a0f0869/fninf-07-00012-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/ca9ef893224c/fninf-07-00012-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/8ebd795213f3/fninf-07-00012-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1fe/3703526/3ba9f0936f60/fninf-07-00012-g0004.jpg

相似文献

1
Toward open sharing of task-based fMRI data: the OpenfMRI project.迈向基于任务的 fMRI 数据的开放共享:OpenfMRI 项目。
Front Neuroinform. 2013 Jul 8;7:12. doi: 10.3389/fninf.2013.00012. eCollection 2013.
2
OpenfMRI: Open sharing of task fMRI data.开放功能磁共振成像:任务功能磁共振成像数据的开放共享。
Neuroimage. 2017 Jan;144(Pt B):259-261. doi: 10.1016/j.neuroimage.2015.05.073. Epub 2015 Jun 3.
3
Utilizing wavelet deep learning network to classify different states of task-fMRI for verifying activation regions.利用小波深度学习网络对任务 fMRI 的不同状态进行分类,以验证激活区域。
Int J Neurosci. 2020 Jun;130(6):583-594. doi: 10.1080/00207454.2019.1698568. Epub 2019 Dec 4.
4
Making data sharing work: the FCP/INDI experience.实现数据共享:FCP/INDI 的经验。
Neuroimage. 2013 Nov 15;82:683-91. doi: 10.1016/j.neuroimage.2012.10.064. Epub 2012 Oct 30.
5
NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain.NeuroVault.org:一个用于共享人类大脑未阈值化统计图谱、脑区划分和图谱集的资源库。
Neuroimage. 2016 Jan 1;124(Pt B):1242-1244. doi: 10.1016/j.neuroimage.2015.04.016. Epub 2015 Apr 11.
6
Data sharing in neuroimaging research.神经影像学研究中的数据共享。
Front Neuroinform. 2012 Apr 5;6:9. doi: 10.3389/fninf.2012.00009. eCollection 2012.
7
The cognitive atlas: toward a knowledge foundation for cognitive neuroscience.认知图谱:迈向认知神经科学的知识基础。
Front Neuroinform. 2011 Sep 6;5:17. doi: 10.3389/fninf.2011.00017. eCollection 2011.
8
fMRI volume classification using a 3D convolutional neural network robust to shifted and scaled neuronal activations.使用对移位和缩放神经元激活具有鲁棒性的 3D 卷积神经网络进行 fMRI 体积分类。
Neuroimage. 2020 Dec;223:117328. doi: 10.1016/j.neuroimage.2020.117328. Epub 2020 Sep 5.
9
Making big data open: data sharing in neuroimaging.使大数据开放:神经影像学中的数据共享。
Nat Neurosci. 2014 Nov;17(11):1510-7. doi: 10.1038/nn.3818. Epub 2014 Oct 28.
10
Big data, open science and the brain: lessons learned from genomics.大数据、开放科学与大脑:从基因组学中汲取的经验教训。
Front Hum Neurosci. 2014 May 16;8:239. doi: 10.3389/fnhum.2014.00239. eCollection 2014.

引用本文的文献

1
Challenging the status quo: A guide to open and reproducible neuroimaging for early career researchers.挑战现状:早期职业研究人员的开放和可重复神经影像学指南。
Imaging Neurosci (Camb). 2025 Jun 24;3. doi: 10.1162/IMAG.a.21. eCollection 2025.
2
SECONDGRAM: Self-conditioned diffusion with gradient manipulation for longitudinal MRI imputation.SECONDGRAM:用于纵向磁共振成像插补的梯度操纵自条件扩散。
Patterns (N Y). 2025 Mar 31;6(5):101212. doi: 10.1016/j.patter.2025.101212. eCollection 2025 May 9.
3
An fMRI dataset for investigating language control and cognitive control in bilinguals.

本文引用的文献

1
A test-retest fMRI dataset for motor, language and spatial attention functions.运动、语言和空间注意功能的再测试 fMRI 数据集。
Gigascience. 2013 Apr 29;2(1):6. doi: 10.1186/2047-217X-2-6.
2
The ethics of secondary data analysis: considering the application of Belmont principles to the sharing of neuroimaging data.二次数据分析的伦理:考虑将贝尔蒙原则应用于神经影像学数据共享。
Neuroimage. 2013 Nov 15;82:671-6. doi: 10.1016/j.neuroimage.2013.02.040. Epub 2013 Mar 4.
3
Making data sharing count: a publication-based solution.让数据共享有意义:一种基于出版物的解决方案。
一个用于研究双语者语言控制和认知控制的功能磁共振成像数据集。
Sci Data. 2025 May 28;12(1):889. doi: 10.1038/s41597-025-05245-9.
4
in the orbitofrontal cortex explains how loss aversion adapts to the ranges of gain and loss prospects.眶额皮质中的情况解释了损失厌恶如何适应收益和损失前景的范围。
Elife. 2024 Dec 9;13:e80979. doi: 10.7554/eLife.80979.
5
The BRAIN Initiative data-sharing ecosystem: Characteristics, challenges, benefits, and opportunities.大脑倡议数据共享生态系统:特征、挑战、益处和机遇。
Elife. 2024 Nov 27;13:e94000. doi: 10.7554/eLife.94000.
6
Efficient federated learning for distributed neuroimaging data.用于分布式神经影像数据的高效联邦学习
Front Neuroinform. 2024 Sep 9;18:1430987. doi: 10.3389/fninf.2024.1430987. eCollection 2024.
7
The past, present, and future of the brain imaging data structure (BIDS).脑成像数据结构(BIDS)的过去、现在与未来
Imaging Neurosci (Camb). 2024 Mar 8;2:1-19. doi: 10.1162/imag_a_00103. eCollection 2024 Mar 1.
8
Machine learning with multiple modalities of brain magnetic resonance imaging data to identify the presence of bipolar disorder.基于脑磁共振成像多模态数据的机器学习识别双相障碍。
J Affect Disord. 2025 Jan 1;368:448-460. doi: 10.1016/j.jad.2024.09.025. Epub 2024 Sep 14.
9
Parent attitudes towards data sharing in developmental science.父母对发育科学中数据共享的态度。
Open Res Eur. 2024 Jun 3;3:182. doi: 10.12688/openreseurope.16516.2. eCollection 2023.
10
Interactive data exploration websites for large-scale electrophysiology.用于大规模电生理学的交互式数据探索网站。
bioRxiv. 2024 Jun 14:2024.06.07.597950. doi: 10.1101/2024.06.07.597950.
Front Neurosci. 2013 Feb 6;7:9. doi: 10.3389/fnins.2013.00009. eCollection 2013.
4
Why share data? Lessons learned from the fMRIDC.为何要分享数据?fMRIDC 的经验教训。
Neuroimage. 2013 Nov 15;82:677-82. doi: 10.1016/j.neuroimage.2012.11.010. Epub 2012 Nov 13.
5
Making data sharing work: the FCP/INDI experience.实现数据共享:FCP/INDI 的经验。
Neuroimage. 2013 Nov 15;82:683-91. doi: 10.1016/j.neuroimage.2012.10.064. Epub 2012 Oct 30.
6
The NKI-Rockland Sample: A Model for Accelerating the Pace of Discovery Science in Psychiatry.NKI-Rockland 样本:加速精神病学发现科学步伐的模型。
Front Neurosci. 2012 Oct 16;6:152. doi: 10.3389/fnins.2012.00152. eCollection 2012.
7
On the plurality of (methodological) worlds: estimating the analytic flexibility of FMRI experiments.关于(方法论)世界的多样性:估计 fMRI 实验的分析灵活性。
Front Neurosci. 2012 Oct 11;6:149. doi: 10.3389/fnins.2012.00149. eCollection 2012.
8
Decreasing ventromedial prefrontal cortex activity during sequential risk-taking: an FMRI investigation of the balloon analog risk task.在连续冒险过程中腹内侧前额叶皮质活动的减少:一项关于气球模拟风险任务的功能磁共振成像研究
Front Neurosci. 2012 Jun 4;6:80. doi: 10.3389/fnins.2012.00080. eCollection 2012.
9
Social-cognitive deficits in normal aging.正常衰老中的社会认知缺陷。
J Neurosci. 2012 Apr 18;32(16):5553-61. doi: 10.1523/JNEUROSCI.5511-11.2012.
10
Data sharing in neuroimaging research.神经影像学研究中的数据共享。
Front Neuroinform. 2012 Apr 5;6:9. doi: 10.3389/fninf.2012.00009. eCollection 2012.