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免疫抑制剂雷帕霉素的产生菌雷帕霉素链霉菌菌株NRRL 5491的基因组序列草图

Draft Genome Sequence of Streptomyces rapamycinicus Strain NRRL 5491, the Producer of the Immunosuppressant Rapamycin.

作者信息

Baranasic Damir, Gacesa Ranko, Starcevic Antonio, Zucko Jurica, Blazic Marko, Horvat Marinka, Gjuracic Kresimir, Fujs Stefan, Hranueli Daslav, Kosec Gregor, Cullum John, Petkovic Hrvoje

机构信息

Acies Bio d.o.o., Ljubljana, Slovenia.

出版信息

Genome Announc. 2013 Aug 8;1(4):e00581-13. doi: 10.1128/genomeA.00581-13.

DOI:10.1128/genomeA.00581-13
PMID:23929477
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3738893/
Abstract

Streptomyces rapamycinicus strain NRRL 5491 produces the important drug rapamycin. It has a large genome of 12.7 Mb, of which over 3 Mb consists of 48 secondary metabolite biosynthesis clusters.

摘要

雷帕霉素链霉菌菌株NRRL 5491可产生重要药物雷帕霉素。它拥有一个1270万个碱基对的大基因组,其中超过300万个碱基对由48个次生代谢物生物合成簇组成。

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本文引用的文献

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mTOR signaling for biological control and cancer.mTOR 信号通路在生物调控和癌症中的作用
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mTOR is a key modulator of ageing and age-related disease.mTOR 是衰老和与年龄相关疾病的关键调节剂。
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Fighting neurodegeneration with rapamycin: mechanistic insights.用雷帕霉素对抗神经退行性疾病:机制见解。
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antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.antiSMASH:快速识别、注释和分析细菌和真菌基因组序列中次生代谢产物生物合成基因簇。
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W339-46. doi: 10.1093/nar/gkr466. Epub 2011 Jun 14.
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ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures.ClustScan:一个用于模块化生物合成基因簇半自动注释和新型化学结构计算机预测的集成程序包。
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Five new members of the Streptomyces violaceusniger 16S rRNA gene clade: Streptomyces castelarensis sp. nov., comb. nov., Streptomyces himastatinicus sp. nov., Streptomyces mordarskii sp. nov., Streptomyces rapamycinicus sp. nov. and Streptomyces ruanii sp. nov.紫色链霉菌16S rRNA基因分支的五个新成员:卡斯特拉链霉菌新种、新组合,喜他汀链霉菌新种,莫尔达尔斯基链霉菌新种,雷帕霉素链霉菌新种和阮氏链霉菌新种。
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Binding of rapamycin analogs to calcium channels and FKBP52 contributes to their neuroprotective activities.雷帕霉素类似物与钙通道及FKBP52的结合有助于其神经保护活性。
Proc Natl Acad Sci U S A. 2008 Jan 8;105(1):33-8. doi: 10.1073/pnas.0710424105. Epub 2007 Dec 27.
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Drug-eluting stents: preventing restenosis.药物洗脱支架:预防再狭窄。
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