Department of Chemistry and Biochemistry, Utah State University, Logan, UT 84322.
Proc Natl Acad Sci U S A. 2013 Oct 8;110(41):16327-32. doi: 10.1073/pnas.1315852110. Epub 2013 Sep 23.
Nitrogenase is activated for N2 reduction by the accumulation of four electrons/protons on its active site FeMo-cofactor, yielding a state, designated as E4, which contains two iron-bridging hydrides [Fe-H-Fe]. A central puzzle of nitrogenase function is an apparently obligatory formation of one H2 per N2 reduced, which would "waste" two reducing equivalents and four ATP. We recently presented a draft mechanism for nitrogenase that provides an explanation for obligatory H2 production. In this model, H2 is produced by reductive elimination of the two bridging hydrides of E4 during N2 binding. This process releases H2, yielding N2 bound to FeMo-cofactor that is doubly reduced relative to the resting redox level, and thereby is activated to promptly generate bound diazene (HN=NH). This mechanism predicts that during turnover under D2/N2, the reverse reaction of D2 with the N2-bound product of reductive elimination would generate dideutero-E4 [E4(2D)], which can relax with loss of HD to the state designated E2, with a single deuteride bridge [E2(D)]. Neither of these deuterated intermediate states could otherwise form in H2O buffer. The predicted E2(D) and E4(2D) states are here established by intercepting them with the nonphysiological substrate acetylene (C2H2) to generate deuterated ethylenes (C2H3D and C2H2D2). The demonstration that gaseous H2/D2 can reduce a substrate other than H(+) with N2 as a cocatalyst confirms the essential mechanistic role for H2 formation, and hence a limiting stoichiometry for biological nitrogen fixation of eight electrons/protons, and provides direct experimental support for the reductive elimination mechanism.
固氮酶通过其活性位点 FeMo 辅因子上四个电子/质子的积累而被激活,用于 N2 还原,生成一个被指定为 E4 的状态,其中包含两个铁桥联氢化物 [Fe-H-Fe]。固氮酶功能的一个核心难题是似乎必须形成每还原一个 N2 就产生一个 H2,这将“浪费”两个还原当量和四个 ATP。我们最近提出了一个固氮酶的草案机制,为必需的 H2 产生提供了一个解释。在该模型中,H2 是通过 E4 在 N2 结合过程中两个桥联氢化物的还原消除产生的。这一过程释放 H2,生成与 FeMo 辅因子结合的 N2,与静息氧化还原水平相比,其被双重还原,从而被激活以迅速生成结合的联氨(HN=NH)。该机制预测,在 D2/N2 下的周转过程中,D2 与还原消除的 N2 结合产物的逆反应将生成双氘代 E4 [E4(2D)],其可以通过与 HD 的损失弛豫到指定的 E2 状态,带有单个氘化物桥 [E2(D)]。在 H2O 缓冲液中,否则这些氘代中间态都不能形成。这里通过用非生理底物乙炔(C2H2)拦截它们来建立预测的 E2(D)和 E4(2D)状态,以生成氘代乙烯(C2H3D 和 C2H2D2)。气态 H2/D2 可以将 H(+)以外的底物还原为 N2 作为共催化剂的事实,证实了 H2 形成的关键机制作用,因此限制了生物固氮的电子/质子的计量比为八,并且为还原消除机制提供了直接的实验支持。