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光诱导从固氮酶二氢化物(两面神)状态还原消除氢涉及铁钼辅因子 - 氢中间体。

Photoinduced Reductive Elimination of H from the Nitrogenase Dihydride (Janus) State Involves a FeMo-cofactor-H Intermediate.

作者信息

Lukoyanov Dmitriy, Khadka Nimesh, Dean Dennis R, Raugei Simone, Seefeldt Lance C, Hoffman Brian M

机构信息

Department of Chemistry, Northwestern University , Evanston, Illinois 60208, United States.

Department of Chemistry and Biochemistry, Utah State University , Logan, Utah 84322, United States.

出版信息

Inorg Chem. 2017 Feb 20;56(4):2233-2240. doi: 10.1021/acs.inorgchem.6b02899. Epub 2017 Feb 8.

Abstract

N reduction by nitrogenase involves the accumulation of four reducing equivalents at the active site FeMo-cofactor to form a state with two [Fe-H-Fe] bridging hydrides (denoted E(4H), the Janus intermediate), and we recently demonstrated that the enzyme is activated to cleave the N≡N triple bond by the reductive elimination (re) of H from this state. We are exploring a photochemical approach to obtaining atomic-level details of the re activation process. We have shown that, when E(4H) at cryogenic temperatures is subjected to 450 nm irradiation in an EPR cavity, it cleanly undergoes photoinduced re of H to give a reactive doubly reduced intermediate, denoted E(2H), which corresponds to the intermediate that would form if thermal dissociative re loss of H preceded N binding. Experiments reported here establish that photoinduced re primarily occurs in two steps. Photolysis of E(4H) generates an intermediate state that undergoes subsequent photoinduced conversion to [E(2H) + H]. The experiments, supported by DFT calculations, indicate that the trapped intermediate is an H complex on the ground adiabatic potential energy suface that connects E(4H) with [E(2H)* + H]. We suggest that this complex, denoted E(H; 2H), is a thermally populated intermediate in the catalytically central re of H by E(4H) and that N reacts with this complex to complete the activated conversion of [E(4H) + N] into [E(2N2H) + H].

摘要

固氮酶使氮还原涉及在活性位点铁钼辅因子处积累四个还原当量,以形成具有两个[Fe-H-Fe]桥连氢化物的状态(表示为E(4H),即两面神中间体),并且我们最近证明该酶通过从该状态进行氢的还原消除(re)而被激活以裂解N≡N三键。我们正在探索一种光化学方法来获取再激活过程的原子水平细节。我们已经表明,当低温下的E(4H)在EPR腔中受到450 nm照射时,它会干净地经历光诱导的氢的re,产生一种反应性双还原中间体,表示为E(2H),它对应于如果在氮结合之前氢发生热解离性re损失时会形成的中间体。此处报道的实验确定光诱导的re主要分两步发生。E(4H)的光解产生一种中间状态,该中间状态随后经历光诱导转化为[E(2H) + H]。这些实验得到密度泛函理论计算的支持,表明捕获的中间体是在连接E(4H)与[E(2H)* + H]的基态绝热势能面上的氢络合物。我们认为这种络合物,表示为E(H; 2H),是E(4H)在催化中心的氢的re过程中热填充的中间体,并且氮与这种络合物反应以完成[E(4H) + N]到[E(2N2H) + H]的活化转化。

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本文引用的文献

2
Photochemistry of Transition Metal Hydrides.
Chem Rev. 2016 Aug 10;116(15):8506-44. doi: 10.1021/acs.chemrev.6b00204. Epub 2016 Jul 6.
3
Dihydrogen Complexation.
Chem Rev. 2016 Aug 10;116(15):8750-69. doi: 10.1021/acs.chemrev.6b00037. Epub 2016 Mar 14.
4
Reversible Photoinduced Reductive Elimination of H2 from the Nitrogenase Dihydride State, the E(4)(4H) Janus Intermediate.
J Am Chem Soc. 2016 Feb 3;138(4):1320-7. doi: 10.1021/jacs.5b11650. Epub 2016 Jan 20.
6
Mechanism of nitrogen fixation by nitrogenase: the next stage.
Chem Rev. 2014 Apr 23;114(8):4041-62. doi: 10.1021/cr400641x. Epub 2014 Jan 27.
7
Kinetics and thermodynamics of small molecule binding to pincer-PCP rhodium(I) complexes.
Inorg Chem. 2013 Apr 15;52(8):4160-72. doi: 10.1021/ic300672g. Epub 2013 Mar 29.
8
Nitrogenase: a draft mechanism.
Acc Chem Res. 2013 Feb 19;46(2):587-95. doi: 10.1021/ar300267m. Epub 2013 Jan 4.
9
New Routes to Low-Coordinate Iron Hydride Complexes: The Binuclear Oxidative Addition of H(2).
J Organomet Chem. 2009 Aug;694(17):nihms111237. doi: 10.1016/j.jorganchem.2009.04.005.
10
The hydride route to the preparation of dinitrogen complexes.
Chem Commun (Camb). 2010 Feb 21;46(7):1013-25. doi: 10.1039/b922853e. Epub 2010 Jan 11.

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