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阐明 Aspergillus nidulans UDP-半乳糖-4-差向异构酶的底物特异性。

Elucidation of substrate specificity in Aspergillus nidulans UDP-galactose-4-epimerase.

机构信息

Department of Chemistry, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.

出版信息

PLoS One. 2013 Oct 7;8(10):e76803. doi: 10.1371/journal.pone.0076803. eCollection 2013.

Abstract

The frequency of invasive fungal infections has rapidly increased in recent years. Current clinical treatments are experiencing decreased potency due to severe host toxicity and the emergence of fungal drug resistance. As such, new targets and their corresponding synthetic pathways need to be explored for drug development purposes. In this context, galactofuranose residues, which are employed in fungal cell wall construction, but are notably absent in animals, represent an appealing target. Herein we present the structural and biochemical characterization of UDP-galactose-4-epimerase from Aspergillus nidulans which produces the precursor UDP-galactopyranose required for galactofuranose synthesis. Examination of the structural model revealed both NAD(+) and UDP-glucopyranose were bound within the active site cleft in a near identical fashion to that found in the Human epimerase. Mutational studies on the conserved catalytic motif support a similar mechanism to that established for the Human counterpart is likely operational within the A. nidulans epimerase. While the K m and k cat for the enzyme were determined to be 0.11 mM and 12.8 s(-1), respectively, a single point mutation, namely L320C, activated the enzyme towards larger N-acetylated substrates. Docking studies designed to probe active site affinity corroborate the experimentally determined activity profiles and support the kinetic inhibition results.

摘要

近年来,侵袭性真菌感染的频率迅速增加。由于宿主毒性严重和真菌耐药性的出现,目前的临床治疗方法效力降低。因此,需要探索新的靶点及其相应的合成途径,以开发药物。在这种情况下,真菌细胞壁构建中使用的但在动物中明显不存在的半乳糖呋喃糖残基是一个有吸引力的靶点。本文介绍了从构巢曲霉中产生合成半乳糖呋喃糖所需前体 UDP-半乳糖吡喃糖的 UDP-半乳糖 4-差向异构酶的结构和生化特性。结构模型的检查表明,NAD(+)和 UDP-葡萄糖吡喃糖都以与在人类差向异构酶中发现的非常相似的方式结合在活性位点裂缝中。对保守催化基序的突变研究支持与人类同工酶建立的类似机制可能在构巢曲霉差向异构酶中运行。虽然该酶的 K m和 k cat分别为 0.11 mM 和 12.8 s(-1),但单点突变,即 L320C,使酶对更大的 N-乙酰化底物具有活性。旨在探测活性位点亲和力的对接研究证实了实验确定的活性谱,并支持了动力学抑制结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e845/3792076/d732f18c438e/pone.0076803.g001.jpg

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