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用于快速组装定制转录激活样效应因子的ULtiMATE系统。

ULtiMATE system for rapid assembly of customized TAL effectors.

作者信息

Yang Junjiao, Yuan Pengfei, Wen Dingqiao, Sheng Ying, Zhu Shiyou, Yu Yuezhou, Gao Xiang, Wei Wensheng

机构信息

State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China.

出版信息

PLoS One. 2013 Sep 27;8(9):e75649. doi: 10.1371/journal.pone.0075649. eCollection 2013.

Abstract

Engineered TAL-effector nucleases (TALENs) and TALE-based constructs have become powerful tools for eukaryotic genome editing. Although many methods have been reported, it remains a challenge for the assembly of designer-based TALE repeats in a fast, precise and cost-effective manner. We present an ULtiMATE (USER-based Ligation Mediated Assembly of TAL Effector) system for speedy and accurate assembly of customized TALE constructs. This method takes advantage of uracil-specific excision reagent (USER) to create multiple distinct sticky ends between any neighboring DNA fragments for specific ligation. With pre-assembled templates, multiple TALE DNA-binding domains could be efficiently assembled in order within hours with minimal manual operation. This system has been demonstrated to produce both functional TALENs for effective gene knockout and TALE-mediated gene-specific transcription activation (TALE-TA). The feature of both ease-of-operation and high efficiency of ULtiMATE system makes it not only an ideal method for biologic labs, but also an approach well suited for large-scale assembly of TALENs and any other TALE-based constructions.

摘要

工程化转录激活样效应因子核酸酶(TALENs)和基于转录激活样效应因子(TALE)的构建体已成为真核生物基因组编辑的强大工具。尽管已经报道了许多方法,但以快速、精确且经济高效的方式组装基于设计的TALE重复序列仍然是一项挑战。我们提出了一种ULtiMATE(基于尿嘧啶特异性切除试剂的TAL效应因子连接介导组装)系统,用于快速准确地组装定制的TALE构建体。该方法利用尿嘧啶特异性切除试剂(USER)在任何相邻DNA片段之间产生多个不同的粘性末端,以便进行特异性连接。利用预先组装的模板,多个TALE DNA结合结构域可以在数小时内以最少的人工操作按顺序高效组装。该系统已被证明既能产生用于有效基因敲除的功能性TALENs,又能产生TALE介导的基因特异性转录激活(TALE-TA)。ULtiMATE系统操作简便且效率高的特点使其不仅是生物实验室的理想方法,也是一种非常适合大规模组装TALENs和任何其他基于TALE的构建体的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e4ec/3815405/4a56d115dcb9/pone.0075649.g001.jpg

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