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铜绿假单胞菌中PctA和PctB化学感受器与氨基酸结合的配体结合区域的纯化、结晶及初步晶体学分析

Purification, crystallization and preliminary crystallographic analysis of the ligand-binding regions of the PctA and PctB chemoreceptors from Pseudomonas aeruginosa in complex with amino acids.

作者信息

Rico-Jiménez Miriam, Muñoz-Martínez Francisco, Krell Tino, Gavira Jose A, Pineda-Molina Estela

机构信息

Department of Environmental Protection, Consejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Calle Profesor Albareda 1, E-18008 Granada, Spain.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Dec;69(Pt 12):1431-5. doi: 10.1107/S1744309113023592. Epub 2013 Nov 29.

Abstract

Pseudomonas aeruginosa is an opportunistic pathogen and one of the major model organisms for the study of chemotaxis. The bacterium harbours 26 genes encoding chemoreceptors, most of which have not been annotated with a function. The paralogous chemoreceptors PctA and PctB (Pseudomonas chemotactic transducer A and B) were found to mediate chemotaxis towards L-amino acids. However, the ligand spectrum of the receptors is quite different since the recombinant ligand-binding region (LBR) of PctA binds 17 different L-amino acids whereas that of PctB recognizes only five. To determine the molecular basis underlying this ligand specificity, PctA-LBR and PctB-LBR have been purified and crystals have been produced after pre-incubation with L-Ile and L-Arg, respectively. Initial crystallization conditions have been identified by the counter-diffusion method and X-ray data have been collected at 2.5 Å (PctA-LBR bound to L-Ile) and 3.14 Å (PctB-LBR bound to L-Arg) resolution. Crystals belonged to space groups P2(1)2(1)2(1) and P3(1)2(1), with unit-cell parameters a = 72.2, b = 78.5, c = 116.6 Å and a = b = 111.6, c = 117.4, respectively, for PctA-LBR and PctB-LBR. Molecular-replacement methods will be pursued for structural determination.

摘要

铜绿假单胞菌是一种机会致病菌,也是研究趋化作用的主要模式生物之一。该细菌含有26个编码化学感受器的基因,其中大多数基因尚未标注功能。已发现同源化学感受器PctA和PctB(假单胞菌趋化转导器A和B)介导对L-氨基酸的趋化作用。然而,这些感受器的配体谱有很大不同,因为PctA的重组配体结合区域(LBR)能结合17种不同的L-氨基酸,而PctB的重组配体结合区域仅识别5种。为确定这种配体特异性的分子基础,已分别纯化了PctA-LBR和PctB-LBR,并在分别与L-异亮氨酸和L-精氨酸预孵育后获得了晶体。通过逆向扩散法确定了初始结晶条件,并分别在2.5 Å(PctA-LBR与L-异亮氨酸结合)和3.14 Å(PctB-LBR与L-精氨酸结合)分辨率下收集了X射线数据。PctA-LBR和PctB-LBR的晶体分别属于空间群P2(1)2(1)2(1)和P3(1)2(1),晶胞参数分别为a = 72.2,b = 78.5,c = 116.6 Å和a = b = 111.6,c = 117.4。将采用分子置换法进行结构测定。

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