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总结来自多个剂量反应实验的半数有效浓度(EC50)估计值:荟萃分析策略与混合效应模型方法的比较。

Summarizing EC50 estimates from multiple dose-response experiments: a comparison of a meta-analysis strategy to a mixed-effects model approach.

作者信息

Jiang Xiaoqi, Kopp-Schneider Annette

机构信息

Division of Biostatistics, German Cancer Research Center, Im Neuenheimer Feld, 280, 69120 Heidelberg, Germany.

出版信息

Biom J. 2014 May;56(3):493-512. doi: 10.1002/bimj.201300123. Epub 2014 Jan 29.

Abstract

Dose-response studies are performed to investigate the potency of a compound. EC50 is the concentration of the compound that gives half-maximal response. Dose-response data are typically evaluated by using a log-logistic model that includes EC50 as one of the model parameters. Often, more than one experiment is carried out to determine the EC50 value for a compound, requiring summarization of EC50 estimates from a series of experiments. In this context, mixed-effects models are designed to estimate the average behavior of EC50 values over all experiments by considering the variabilities within and among experiments simultaneously. However, fitting nonlinear mixed-effects models is more complicated than in a linear situation, and convergence problems are often encountered. An alternative strategy is the application of a meta-analysis approach, which combines EC50 estimates obtained from separate log-logistic model fitting. These two proposed strategies to summarize EC50 estimates from multiple experiments are compared in a simulation study and real data example. We conclude that the meta-analysis strategy is a simple and robust method to summarize EC50 estimates from multiple experiments, especially suited in the case of a small number of experiments.

摘要

剂量反应研究旨在探究化合物的效力。半数有效浓度(EC50)是产生最大反应一半时的化合物浓度。剂量反应数据通常采用对数逻辑模型进行评估,该模型将EC50作为模型参数之一。通常,为确定化合物的EC50值会进行不止一项实验,这就需要汇总一系列实验中对EC50的估计值。在此背景下,混合效应模型旨在通过同时考虑实验内部和实验之间的变异性来估计所有实验中EC50值的平均表现。然而,拟合非线性混合效应模型比线性情况更为复杂,且经常会遇到收敛问题。另一种策略是应用荟萃分析方法,该方法将从单独的对数逻辑模型拟合中获得的EC50估计值进行合并。在一项模拟研究和实际数据示例中,对这两种用于汇总多个实验中EC50估计值的策略进行了比较。我们得出结论,荟萃分析策略是一种简单且稳健的方法,可用于汇总多个实验中的EC50估计值,尤其适用于实验数量较少的情况。

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