从人类肠道微生物群中分离出的口腔短双歧杆菌菌株JMR01的基因组测序草图
Draft Genome Sequencing of Methanobrevibacter oralis Strain JMR01, Isolated from the Human Intestinal Microbiota.
作者信息
Khelaifia Saber, Garibal Marc, Robert Catherine, Raoult Didier, Drancourt Michel
机构信息
Aix Marseille Université, URMITE, UMR63 CNRS 7278, IRD 198, Inserm 1095, Marseille, France.
出版信息
Genome Announc. 2014 Feb 20;2(1):e00073-14. doi: 10.1128/genomeA.00073-14.
Abstract
Methanobrevibacter oralis, an anaerobic methanogenic archaeon, has been previously isolated from the human oral cavity. Here, sequencing a stool isolate (strain JMR01) yielded a 2.065-Mb genome with a 27.78% G+C content containing a total of 2,042 open reading frames and 3 clusters of regularly interspaced short palindromic repeat (CRISPR) loci with associated Cas proteins.
摘要
口腔甲烷短杆菌是一种厌氧产甲烷古菌，此前已从人类口腔中分离出来。在这里，对一株粪便分离株（菌株JMR01）进行测序，得到了一个2.065兆碱基的基因组，其鸟嘌呤与胞嘧啶含量为27.78%，共包含2042个开放阅读框和3个成簇规律间隔短回文重复序列（CRISPR）位点以及相关的Cas蛋白。
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