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嗜树栖短柄产甲烷菌（Methanobrevibacter arboriphilicus）人源分离株的基因组序列草图，该古菌具有最低的G+C含量

Draft Genome Sequence of a Human-Associated Isolate of Methanobrevibacter arboriphilicus, the Lowest-G+C-Content Archaeon.

作者信息

Khelaifia Saber, Garibal Marc, Robert Catherine, Raoult Didier, Drancourt Michel

机构信息

Aix Marseille Université, URMITE, UMR63 CNRS 7278, IRD 198, INSERM 1095, Marseille, France.

出版信息

Genome Announc. 2014 Jan 23;2(1):e01181-13. doi: 10.1128/genomeA.01181-13.

DOI:10.1128/genomeA.01181-13
PMID:24459264
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3900896/
Abstract

We report the draft genome sequence of Methanobrevibacter arboriphilicus strain ANOR1, isolated from the human gut. Its 2.21-Mb genome exhibits a 25.46% G+C content, the lowest value among archaea. The genome of M. arboriphilicus contains a total of 2,111 open reading frames and three clusters of regularly interspaced short palindromic repeat (CRISPR) loci with associated Cas proteins.

摘要

我们报告了从人类肠道分离出的嗜树栖甲烷短杆菌菌株ANOR1的基因组序列草图。其2.21 Mb的基因组G+C含量为25.46%，是古菌中最低的值。嗜树栖甲烷短杆菌的基因组总共包含2111个开放阅读框和三个带有相关Cas蛋白的规律间隔短回文重复序列（CRISPR）基因座簇。

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Draft Genome Sequence of a Human-Associated Isolate of Methanobrevibacter arboriphilicus, the Lowest-G+C-Content Archaeon.嗜树栖短柄产甲烷菌（Methanobrevibacter arboriphilicus）人源分离株的基因组序列草图，该古菌具有最低的G+C含量
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本文引用的文献

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A versatile medium for cultivating methanogenic archaea.一种用于培养产甲烷古菌的多功能培养基。
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Complete genome sequence of Methanomassiliicoccus luminyensis, the largest genome of a human-associated Archaea species.甲烷微菌属 luminyensis 的完整基因组序列，该菌是与人类相关的古菌物种中基因组最大的。
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Halophilic archaea in the human intestinal mucosa.人类肠道黏膜中的嗜盐古菌。
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The RAST Server: rapid annotations using subsystems technology.RAST服务器：使用子系统技术进行快速注释。
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Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut.史氏甲烷短杆菌对人类肠道的基因组和代谢适应性
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Methanobrevibacter millerae sp. nov. and Methanobrevibacter olleyae sp. nov., methanogens from the ovine and bovine rumen that can utilize formate for growth.米勒氏甲烷短杆菌新种和奥利氏甲烷短杆菌新种，来自绵羊和牛瘤胃的产甲烷菌，可利用甲酸盐进行生长。
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The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis.史氏甲烷球形菌的基因组序列揭示了为何这种人类肠道古菌仅利用甲醇和氢气来生成甲烷及合成ATP。
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