Suppr超能文献

一种使用色相饱和度值分析程序消除样本间差异的新型定量方法。

A novel quantitative approach for eliminating sample-to-sample variation using a hue saturation value analysis program.

作者信息

Yabusaki Katsumi, Faits Tyler, McMullen Eri, Figueiredo Jose Luiz, Aikawa Masanori, Aikawa Elena

机构信息

Center for Interdisciplinary Cardiovascular Sciences, Division of Cardiovascular Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, United States of America.

Center for Interdisciplinary Cardiovascular Sciences, Division of Cardiovascular Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, United States of America; Center for Excellence in Vascular Biology, Division of Cardiovascular Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, United States of America.

出版信息

PLoS One. 2014 Mar 3;9(3):e89627. doi: 10.1371/journal.pone.0089627. eCollection 2014.

Abstract

OBJECTIVES

As computing technology and image analysis techniques have advanced, the practice of histology has grown from a purely qualitative method to one that is highly quantified. Current image analysis software is imprecise and prone to wide variation due to common artifacts and histological limitations. In order to minimize the impact of these artifacts, a more robust method for quantitative image analysis is required.

METHODS AND RESULTS

Here we present a novel image analysis software, based on the hue saturation value color space, to be applied to a wide variety of histological stains and tissue types. By using hue, saturation, and value variables instead of the more common red, green, and blue variables, our software offers some distinct advantages over other commercially available programs. We tested the program by analyzing several common histological stains, performed on tissue sections that ranged from 4 µm to 10 µm in thickness, using both a red green blue color space and a hue saturation value color space.

CONCLUSION

We demonstrated that our new software is a simple method for quantitative analysis of histological sections, which is highly robust to variations in section thickness, sectioning artifacts, and stain quality, eliminating sample-to-sample variation.

摘要

目的

随着计算技术和图像分析技术的发展,组织学实践已从一种纯粹的定性方法发展为一种高度量化的方法。由于常见的伪像和组织学局限性,当前的图像分析软件不精确且容易出现较大差异。为了最小化这些伪像的影响,需要一种更强大的定量图像分析方法。

方法与结果

在此,我们展示了一种基于色相饱和度值颜色空间的新型图像分析软件,可应用于多种组织学染色和组织类型。通过使用色相、饱和度和值变量而非更常见的红、绿、蓝变量,我们的软件相对于其他商业可用程序具有一些明显优势。我们通过分析几种常见的组织学染色来测试该程序,这些染色在厚度从4微米到10微米的组织切片上进行,同时使用红、绿、蓝颜色空间和色相、饱和度、值颜色空间。

结论

我们证明了我们的新软件是一种用于组织学切片定量分析的简单方法,对切片厚度、切片伪像和染色质量的变化具有高度鲁棒性,消除了样本间的差异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3121/3940696/146b6789fd2b/pone.0089627.g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验