Neumaier Sabine, Kiefhaber Thomas
Munich Center for Integrated Protein Science and Chemistry Department, Technische Universität München, Lichtenbergstrasse 4, D-85747 Garching, Germany.
Munich Center for Integrated Protein Science and Chemistry Department, Technische Universität München, Lichtenbergstrasse 4, D-85747 Garching, Germany.
J Mol Biol. 2014 Jun 26;426(13):2520-8. doi: 10.1016/j.jmb.2014.04.022. Epub 2014 May 2.
Dynamics and function of proteins are governed by the structural and energetic properties of the different states they adopt and the barriers separating them. In earlier work, native-state triplet-triplet energy transfer (TTET) on the villin headpiece subdomain (HP35) revealed an equilibrium between a locked native state and an unlocked native state, which are structurally similar but have different dynamic properties. The locked state is restricted to low amplitude motions, whereas the unlocked state shows increased conformational flexibility and undergoes local unfolding reactions. This classified the unlocked state as a dry molten globule (DMG), which was proposed to represent an expanded native state with loosened side-chain interactions and a solvent-shielded core. To test whether the unlocked state of HP35 is actually expanded compared to the locked state, we performed high-pressure TTET measurements. Increasing pressure shifts the equilibrium from the locked toward the unlocked state, with a small negative reaction volume for unlocking (ΔV(0)=-1.6±0.5cm(3)/mol). Therefore, rather than being expanded, the unlocked state represents an alternatively packed, compact state, demonstrating that native proteins can exist in several compact folded states, an observation with implications for protein function. The transition state for unlocking/locking, in contrast, has a largely increased volume relative to the locked and unlocked state, with respective activation volumes of 7.1±0.4cm(3)/mol and 8.7±0.9cm(3)/mol, indicating an expansion of the protein during the locking/unlocking transition. The presented results demonstrate the existence of both compact, low-energy and expanded, high-energy DMGs, prompting a broader definition of this state.
蛋白质的动力学和功能由其不同状态的结构和能量特性以及分隔这些状态的势垒所决定。在早期的研究中,肌动蛋白结合蛋白头部亚结构域(HP35)上的天然态三重态-三重态能量转移(TTET)揭示了一种锁定天然态和非锁定天然态之间的平衡,这两种状态在结构上相似,但具有不同的动力学特性。锁定态限制于低振幅运动,而非锁定态则表现出增加的构象灵活性并经历局部解折叠反应。这将非锁定态归类为干态熔球(DMG),有人提出它代表一种具有松散侧链相互作用和溶剂屏蔽核心的扩展天然态。为了测试HP35的非锁定态与锁定态相比是否实际上是扩展的,我们进行了高压TTET测量。压力增加会使平衡从锁定态向非锁定态移动,解锁时的反应体积为小的负值(ΔV(0)= -1.6±0.5cm³/mol)。因此,非锁定态并非是扩展的,而是代表一种重新堆积的紧密状态,这表明天然蛋白质可以以几种紧密折叠状态存在,这一观察结果对蛋白质功能具有重要意义。相比之下,解锁/锁定的过渡态相对于锁定态和非锁定态具有大幅增加的体积,其活化体积分别为7.1±0.4cm³/mol和8.7±0.9cm³/mol,表明在锁定/解锁转变过程中蛋白质发生了扩展。所呈现的结果证明了紧密的低能量和扩展的高能量DMG的存在,促使对这种状态进行更广泛的定义。