• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

迈向糖苷水解酶中碳水化合物连续性的分子水平理论。

Towards a molecular-level theory of carbohydrate processivity in glycoside hydrolases.

机构信息

National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO 80401, United States.

Swedish University of Agricultural Sciences, SE 75007 Uppsala, Sweden.

出版信息

Curr Opin Biotechnol. 2014 Jun;27:96-106. doi: 10.1016/j.copbio.2013.12.002. Epub 2014 Jan 4.

DOI:10.1016/j.copbio.2013.12.002
PMID:24863902
Abstract

Polysaccharide depolymerization in nature is primarily accomplished by processive glycoside hydrolases (GHs), which abstract single carbohydrate chains from polymer crystals and cleave glycosidic linkages without dissociating after each catalytic event. Understanding the molecular-level features and structural aspects of processivity is of importance due to the prevalence of processive GHs in biomass-degrading enzyme cocktails. Here, we describe recent advances towards the development of a molecular-level theory of processivity for cellulolytic and chitinolytic enzymes, including the development of novel methods for measuring rates of key steps in processive action and insights gained from structural and computational studies. Overall, we present a framework for developing structure-function relationships in processive GHs and outline additional progress towards developing a fundamental understanding of these industrially important enzymes.

摘要

自然界中的多糖解聚主要是通过连续糖苷水解酶(GHs)完成的,这些酶从聚合物晶体中提取单糖链,并在每次催化事件后不解离就切割糖苷键。由于连续 GHs 在生物量降解酶混合物中普遍存在,因此了解其连续性的分子水平特征和结构方面非常重要。在这里,我们描述了在开发纤维素酶和几丁质酶的分子水平连续性理论方面的最新进展,包括开发用于测量连续作用关键步骤速率的新方法以及从结构和计算研究中获得的见解。总体而言,我们提出了一个在连续 GHs 中开发结构-功能关系的框架,并概述了在深入了解这些具有工业重要性的酶方面取得的进一步进展。

相似文献

1
Towards a molecular-level theory of carbohydrate processivity in glycoside hydrolases.迈向糖苷水解酶中碳水化合物连续性的分子水平理论。
Curr Opin Biotechnol. 2014 Jun;27:96-106. doi: 10.1016/j.copbio.2013.12.002. Epub 2014 Jan 4.
2
Measuring processivity.测量持续合成能力
Methods Enzymol. 2012;510:69-95. doi: 10.1016/B978-0-12-415931-0.00005-7.
3
A steady-state theory for processive cellulases.一个关于连续作用纤维素酶的稳态理论。
FEBS J. 2013 Aug;280(16):3952-61. doi: 10.1111/febs.12397. Epub 2013 Jul 12.
4
Kinetic relationships with processivity in Serratia marcescens family 18 glycoside hydrolases.运动关系与粘细菌家族 18 糖苷水解酶的连续性。
Biochem Biophys Res Commun. 2020 Jan 1;521(1):120-124. doi: 10.1016/j.bbrc.2019.10.089. Epub 2019 Oct 16.
5
Enzyme processivity changes with the extent of recalcitrant polysaccharide degradation.酶的持续合成能力随难降解多糖降解程度而变化。
FEBS Lett. 2014 Dec 20;588(24):4620-4. doi: 10.1016/j.febslet.2014.10.034. Epub 2014 Nov 5.
6
Binding site dynamics and aromatic-carbohydrate interactions in processive and non-processive family 7 glycoside hydrolases.在具有行进性和非行进性的家族 7 糖苷水解酶中,结合位点动力学和芳基-碳水化合物相互作用。
J Phys Chem B. 2013 May 2;117(17):4924-33. doi: 10.1021/jp401410h. Epub 2013 Apr 10.
7
Treatment of recalcitrant crystalline polysaccharides with lytic polysaccharide monooxygenase relieves the need for glycoside hydrolase processivity.用裂解多糖单加氧酶处理顽固的结晶多糖可减少对糖苷水解酶持续性的需求。
Carbohydr Res. 2019 Feb 1;473:66-71. doi: 10.1016/j.carres.2019.01.001. Epub 2019 Jan 7.
8
Trade-off between processivity and hydrolytic velocity of cellobiohydrolases at the surface of crystalline cellulose.在结晶纤维素表面,细胞木聚糖酶的延伸性和水解速度之间的权衡。
J Am Chem Soc. 2014 Mar 26;136(12):4584-92. doi: 10.1021/ja4119994. Epub 2014 Mar 14.
9
A mechanistic model for enzymatic saccharification of cellulose using continuous distribution kinetics I: depolymerization by EGI and CBHI.使用连续分布动力学对纤维素进行酶解的机理模型 I:EGI 和 CBHI 的解聚作用。
Biotechnol Bioeng. 2012 Mar;109(3):665-75. doi: 10.1002/bit.23355. Epub 2011 Oct 27.
10
Carbohydrate-protein interactions that drive processive polysaccharide translocation in enzymes revealed from a computational study of cellobiohydrolase processivity.从纤维素酶的延伸性研究中揭示的驱动延伸性多糖易位的碳水化合物-蛋白质相互作用。
J Am Chem Soc. 2014 Jun 18;136(24):8810-9. doi: 10.1021/ja504074g. Epub 2014 Jun 6.

引用本文的文献

1
Thermobifida fusca Cel6B moves bidirectionally while processively degrading cellulose.嗜热栖热放线菌Cel6B在持续降解纤维素的同时进行双向移动。
Biotechnol Biofuels Bioprod. 2024 Dec 4;17(1):140. doi: 10.1186/s13068-024-02588-0.
2
Activity of a Recombinant Chitinase of the Ant on Different Forms of Chitin and Its Fungicidal Effect against .蚂蚁重组几丁质酶对不同形式几丁质的活性及其对……的杀真菌作用
Polymers (Basel). 2024 Feb 15;16(4):529. doi: 10.3390/polym16040529.
3
Glycoside hydrolases in the biodegradation of lignocellulosic biomass.
糖苷水解酶在木质纤维素生物质生物降解中的作用
3 Biotech. 2023 Dec;13(12):402. doi: 10.1007/s13205-023-03819-1. Epub 2023 Nov 16.
4
Molecular mechanisms of processive glycoside hydrolases underline catalytic pragmatism.糖基水解酶的连续作用分子机制体现了催化的实用主义。
Biochem Soc Trans. 2023 Jun 28;51(3):1387-1403. doi: 10.1042/BST20230136.
5
Engineering cellulases for conversion of lignocellulosic biomass.工程化纤维素酶用于木质纤维素生物质转化。
Protein Eng Des Sel. 2023 Jan 21;36. doi: 10.1093/protein/gzad002.
6
Enzyme Synergy in Transient Clusters of Endo- and Exocellulase Enables a Multilayer Mode of Processive Depolymerization of Cellulose.内切和外切纤维素酶瞬态簇中的酶协同作用实现了纤维素连续解聚的多层模式。
ACS Catal. 2022 Sep 2;12(17):10984-10994. doi: 10.1021/acscatal.2c02377. Epub 2022 Aug 24.
7
An ultrasensitive nanofiber-based assay for enzymatic hydrolysis and deep-sea microbial degradation of cellulose.一种基于超灵敏纳米纤维的纤维素酶促水解和深海微生物降解检测方法。
iScience. 2022 Jul 30;25(8):104732. doi: 10.1016/j.isci.2022.104732. eCollection 2022 Aug 19.
8
Processive Enzymes Kept on a Leash: How Cellulase Activity in Multienzyme Complexes Directs Nanoscale Deconstruction of Cellulose.受约束的持续性酶:多酶复合物中的纤维素酶活性如何指导纤维素的纳米级解构
ACS Catal. 2021 Nov 5;11(21):13530-13542. doi: 10.1021/acscatal.1c03465. Epub 2021 Oct 25.
9
Machine learning reveals sequence-function relationships in family 7 glycoside hydrolases.机器学习揭示了家族 7 糖苷水解酶的序列-功能关系。
J Biol Chem. 2021 Aug;297(2):100931. doi: 10.1016/j.jbc.2021.100931. Epub 2021 Jul 1.
10
Repeated gain and loss of a single gene modulates the evolution of vascular plant pathogen lifestyles.单一基因的反复获得和丢失调节了维管束植物病原菌生活方式的进化。
Sci Adv. 2020 Nov 13;6(46). doi: 10.1126/sciadv.abc4516. Print 2020 Nov.