Microbial Culture Collection, National Centre for Cell Science, Pune, Maharastra 411007, India.
Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3010-3015. doi: 10.1099/ijs.0.064295-0. Epub 2014 Jun 6.
A novel Gram-stain-positive, spore-forming, aerobic, non-motile, rod-shaped bacterium designated strain SD111(T) that forms red-pigmented colonies was isolated from a marine sediment sample (collected from 5 m depth) from Lakshadweep, India. Strain SD111(T) grew well on seawater agar at pH 6-10 (optimum pH 7.5±0.2). It showed maximum (97.6 %) 16S rRNA gene sequence similarity and formed a monophyletic clade with Domibacillus robiginosus WS 4628(T) ( = DSM 25058(T)). The genomic DNA G+C content was 37.4 mol% and the strain showed 37.7 % DNA-DNA relatedness to D. robiginosus DSM 25058(T). The major fatty acids were anteiso-C15 : 0, C16 : 0, iso-C15 : 0 and iso-C16 : 0 and MK-6 was the predominant quinone. The polar lipid profile of strain SD111(T) consisted of unidentified phospholipids (PL1 and PL2), phosphatidylglycerol (PG) and diphosphatidylglycerol (DPG). The cell wall contained meso-diaminopimelic acid and the peptidoglycan was of A1γ type. Glucose and ribose were detected as major cell-wall sugars. Results from polyphasic studies indicated that SD111(T) represents a novel species of the genus Domibacillus for which the name Domibacillus indicus sp. nov. is proposed. The type strain is SD111(T) ( = MCC 2255(T) = DSM 28032(T)).
一株新型革兰氏阳性、孢子形成、需氧、非运动、杆状细菌,命名为 SD111(T) 菌株,从印度拉克沙群岛的海洋沉积物样本(采集于 5 米深)中分离得到。该菌株在海水琼脂上生长良好,pH 值为 6-10(最适 pH 值为 7.5±0.2)。它的 16S rRNA 基因序列相似性最高(97.6%),与 Domibacillus robiginosus WS 4628(T)(=DSM 25058(T))形成单系分支。基因组 DNA G+C 含量为 37.4mol%,与 D. robiginosus DSM 25058(T)的 DNA-DNA 同源性为 37.7%。主要脂肪酸为 anteiso-C15:0、C16:0、iso-C15:0 和 iso-C16:0,MK-6 是主要的醌。菌株 SD111(T) 的极性脂谱由未鉴定的磷脂(PL1 和 PL2)、磷脂酰甘油(PG)和双磷脂酰甘油(DPG)组成。细胞壁含有 meso-二氨基庚二酸,肽聚糖为 A1γ 型。检测到葡萄糖和核糖作为主要的细胞壁糖。多相研究结果表明,SD111(T) 代表了 Domibacillus 属的一个新种,建议将其命名为印度 Domibacillus indicus sp. nov.。模式菌株为 SD111(T)(=MCC 2255(T)=DSM 28032(T))。