Shibutani Toshihiro, Ito Shinsuke, Toda Mariko, Kanao Rie, Collins Leonard B, Shibata Marika, Urabe Miho, Koseki Haruhiko, Masuda Yuji, Swenberg James A, Masutani Chikahide, Hanaoka Fumio, Iwai Shigenori, Kuraoka Isao
Graduate School of Engineering Science, Osaka University Graduate School of Engineering Science, 1-3 Machikaneyama, Toyonaka, Osaka 560-8531 Japan.
Laboratory for Developmental Genetics, RIKEN Center for Integrative Medical Sciences, Yokohama 230-0045, Japan.
Sci Rep. 2014 Jun 9;4:5220. doi: 10.1038/srep05220.
The genetic information encoded in genomes must be faithfully replicated and transmitted to daughter cells. The recent discovery of consecutive DNA conversions by TET family proteins of 5-methylcytosine into 5-hydroxymethylcytosine, 5-formylcytosine, and 5-carboxylcytosine (5caC) suggests these modified cytosines act as DNA lesions, which could threaten genome integrity. Here, we have shown that although 5caC pairs with guanine during DNA replication in vitro, G·5caC pairs stimulated DNA polymerase exonuclease activity and were recognized by the mismatch repair (MMR) proteins. Knockdown of thymine DNA glycosylase increased 5caC in genome, affected cell proliferation via MMR, indicating MMR is a novel reader for 5caC. These results suggest the epigenetic modification products of 5caC behave as DNA lesions.
基因组中编码的遗传信息必须被忠实地复制并传递给子细胞。最近发现,TET家族蛋白可将5-甲基胞嘧啶连续转化为5-羟甲基胞嘧啶、5-甲酰基胞嘧啶和5-羧基胞嘧啶(5caC),这表明这些修饰的胞嘧啶可作为DNA损伤,可能威胁基因组完整性。在此,我们已经表明,虽然在体外DNA复制过程中5caC与鸟嘌呤配对,但G·5caC碱基对会刺激DNA聚合酶的核酸外切酶活性,并被错配修复(MMR)蛋白识别。胸腺嘧啶DNA糖基化酶的敲低增加了基因组中的5caC,通过MMR影响细胞增殖,表明MMR是5caC的一种新型识别蛋白。这些结果表明,5caC的表观遗传修饰产物表现为DNA损伤。