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通过多状态迭代玻尔兹曼反演推导粗粒度势。

Derivation of coarse-grained potentials via multistate iterative Boltzmann inversion.

作者信息

Moore Timothy C, Iacovella Christopher R, McCabe Clare

机构信息

Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, Tennessee 37235, USA.

出版信息

J Chem Phys. 2014 Jun 14;140(22):224104. doi: 10.1063/1.4880555.

Abstract

In this work, an extension is proposed to the standard iterative Boltzmann inversion (IBI) method used to derive coarse-grained potentials. It is shown that the inclusion of target data from multiple states yields a less state-dependent potential, and is thus better suited to simulate systems over a range of thermodynamic states than the standard IBI method. The inclusion of target data from multiple states forces the algorithm to sample regions of potential phase space that match the radial distribution function at multiple state points, thus producing a derived potential that is more representative of the underlying interactions. It is shown that the algorithm is able to converge to the true potential for a system where the underlying potential is known. It is also shown that potentials derived via the proposed method better predict the behavior of n-alkane chains than those derived via the standard IBI method. Additionally, through the examination of alkane monolayers, it is shown that the relative weight given to each state in the fitting procedure can impact bulk system properties, allowing the potentials to be further tuned in order to match the properties of reference atomistic and/or experimental systems.

摘要

在这项工作中,我们对用于推导粗粒度势的标准迭代玻尔兹曼反演(IBI)方法提出了一种扩展。结果表明,纳入来自多个状态的目标数据会产生一个与状态相关性较小的势,因此比标准IBI方法更适合模拟一系列热力学状态下的系统。纳入来自多个状态的目标数据迫使算法对与多个状态点处的径向分布函数相匹配的势相空间区域进行采样,从而产生一个更能代表潜在相互作用的推导势。结果表明,对于已知潜在势的系统,该算法能够收敛到真实势。还表明,通过所提出的方法推导的势比通过标准IBI方法推导的势能更好地预测正构烷烃链的行为。此外,通过对烷烃单层的研究表明,在拟合过程中赋予每个状态的相对权重会影响体相系统性质,从而可以进一步调整势以匹配参考原子模型和/或实验系统的性质。

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